Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01263 ATGGCATCTTCAGCAAGGAAGCTTGAGCTTCTCTGGTTCATTCTTATCTTCATTTGGGTTCCATCTTCATCATCACAGACACTTGTTATGCCCCTCACACATTCAATCTCCAAAGAGCAATTCAACAGTACCCACAACCTCCTCAAATCCACTTCCACCCGTTCCGCCGTCCGCTTCCACCACCAACGCCAACGTCATCGCCAGCACCAAGTTTCCCTTCCTCTCTCCCCTGGAAGCGACTACACCTTGTCCTTCACCCTGGGCTCTGGCCCGGCCCAGGCCCATCCCATAACCCTCTATATGGACACAGGCAGCGACCTTGTCTGGTTCCCCTGTGCCCCCTTCGAGTGCATACTCTGCGAGGGAAAGCCCAGCCCAGGCCCAAGCAGGCCACCAAACATCACACGGGCCCACGCAGTGTCATGCCAGTCACCTGCATGCTCCGCGGCCCACTCCTCCACGTCATCATCCGACCTCTGCGCAATGGCACGTTGCCCCTTAGACGCCATAGAAACTTCTGATTGCAGTTCATCGGCGTGTCCGCCATTCTACTACGCTTACGGCGACGGAAGCTTAATCGCAAACCTCTATCGCCACACACTCTCTATGTCTTCTCTCGTTCTCAAGAACTTCACCTTCGGTTGCGCCCACACCACCCTCGGTGAGCCCACCGGCGTCGCTGGTTTCGGCCGTGGTTTGCTCTCTTTTCCGGCCCAGTTAGCCACCTTCTCTCCTCAGCTCGGTAATCGATTCTCATACTGTTTGGTATCTCATTCTTTCAACGGCGATCGAATTCGTCGCCCGAGTCCACTCATTCTCGGCCGTCGCGACGGCGGGGACGAACACGGTGAGTTCGTGTACACGTCCCTGCTTCGGAACCCGAAGCACCCGTACTTTTACTCCGTCGGGCTAGCTGGAATCTCAGTCGGGAAGAGGGATATTCCGGCGCCAGAGATACTGAGGAAGGTGGACGCGACAGGGAGTGGTGGTGTTGTAGTTGATTCCGGGACGACGTTCACGATGTTGCCAGCGAGTTTGTATAACTCGGTGGTGGCTGAGTTCGACCGGCGAGTGGGGCGAATTCACAAGCGGGCGAGTGAGGTGGAGGGGAAAACGGGTCTGGGTCCATGTTATTACTTGGACACTGTGGCCCAGGTTCCGGCGGTGACGTTGCGTTTTGCGGGGAATGATTCGAGTGTGGTGCTGCCTCGAAGGAACTACTTCTACGAGTTTTTGTACGGTGAAGATGGAGCCACGACGAAAAGAAGAGTGGGGTGCATGATGCTGATGAACGGTGGTGATGATTCTGAGTTAAGTGGTGGACCCGGGGCCACGCTTGGGAATTACCAGCAGCAGGGCTTTGAGGTTATTTACGACCTTGAAAAGCAGCGCGTGGGATTCGCCAGAAGGCAGTGCGCGTTGCTTTGGGATAGCCTGAACCGTGAGAAGAACTAG 1455 0.5581 MASSARKLELLWFILIFIWVPSSSSQTLVMPLTHSISKEQFNSTHNLLKSTSTRSAVRFHHQRQRHRQHQVSLPLSPGSDYTLSFTLGSGPAQAHPITLYMDTGSDLVWFPCAPFECILCEGKPSPGPSRPPNITRAHAVSCQSPACSAAHSSTSSSDLCAMARCPLDAIETSDCSSSACPPFYYAYGDGSLIANLYRHTLSMSSLVLKNFTFGCAHTTLGEPTGVAGFGRGLLSFPAQLATFSPQLGNRFSYCLVSHSFNGDRIRRPSPLILGRRDGGDEHGEFVYTSLLRNPKHPYFYSVGLAGISVGKRDIPAPEILRKVDATGSGGVVVDSGTTFTMLPASLYNSVVAEFDRRVGRIHKRASEVEGKTGLGPCYYLDTVAQVPAVTLRFAGNDSSVVLPRRNYFYEFLYGEDGATTKRRVGCMMLMNGGDDSELSGGPGATLGNYQQQGFEVIYDLEKQRVGFARRQCALLWDSLNREKN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01263 484 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 331 342 IPR001969 GO:0004190|GO:0006508
Arst5g01263 484 Pfam Xylanase inhibitor N-terminal 81 259 IPR032861 -
Arst5g01263 484 PANTHER ASPARTYL PROTEASES 12 466 IPR001461 GO:0004190|GO:0006508
Arst5g01263 484 Gene3D Acid Proteases 277 476 IPR021109 -
Arst5g01263 484 SUPERFAMILY Acid proteases 76 477 IPR021109 -
Arst5g01263 484 FunFam Probable aspartyl protease At4g16563 71 273 - -
Arst5g01263 484 CDD pepsin_A_like_plant 81 472 IPR034161 -
Arst5g01263 484 ProSiteProfiles Peptidase family A1 domain profile. 81 468 IPR033121 -
Arst5g01263 484 FunFam aspartic proteinase nepenthesin-1 275 477 - -
Arst5g01263 484 Pfam Xylanase inhibitor C-terminal 300 468 IPR032799 -
Arst5g01263 484 Gene3D Acid Proteases 58 265 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01263 Arst-Chr5 13480618 13482470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01263 50 475 Miscellaneous Gene Families AT1G77480 25.991 1.09e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01263 - - gmx:100807884 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01263 5 13480618 13482470 Arst5g01263 5 13480618 13482470 ECH