Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01262 ATGAGCAGTGTGAAGGGAAAGGAGAAAGAGAAGGATGTGGAAGTTGTAATAACAACAAGAGGTGACACTGAATCATTAACTACTTATTCTTCTTCTTCTGGTGAGAGAGCGTGGTTGCATTCTGCTGATGGTAGAACTAAATGTCTTCATCCCCCTATTGAAACGCATTGGGAACTCCCTTCATCAGGTGCCAAGAAGCCTTCTTCTTCGTCATCATCAAGCTTCAAGTCACTCTTCACCTTCCCTCTCACCAAACTCAGAAGGACCAAGAGCATGCAAACCGTTCTAGAAGGACCTCGCGATCCAAAAGATGCCCAGATTGTTGAGTCCTTCCGCAGAATGCTCTTTCTTGAGGGTCTCTTACCCACCAAGCACAATGATTATCATACTCTTTTGAGGTTTCTTCGCATGAGAGATTTTGACATGTTGAAATCCAAAGACGTATTTCTCAATTATCTGAAATGGCACGAGGAATTTGGAGTAGACATGCTTCTTAAGGAATTCAAATACCCGGAGTACACAGAAGTAAAGAAATGCTATCCTCATGGATACCATGGGGTTGATAGACATGGCAGACCAGTATACATTGAGAGACTTGGGATGGTAGACCTTAACAAGCTGCTGCAAGTAACCACATTTGAGAGGTTCATAAAGTATCATGTGTCAGAACAAGAGAAAACATTGAGAATAAGATACCCTGCATGTTCCATGGCAGCTAAAAGGCACATAGCATCCACTACAAGTATCTTGGATGTTAATGGAGTAGGAATGTCTAATTTCTCAAAGCCAGCAAGGTACCTCTTTATGGAAATTCAGAAGATCGATAGTAGTTACTATCCTGAGTTCGCTACATCGATGGCCTTGCAGACTCTTCATAAGCTCTTTATTATCAATGCTGGATCCGGCTTCAAAATGCTATGGAAAGCCGTTAAGACATTCCTAGATGTTCGCACAGTAGCAAAAGTTCAAGTGTTAGGTTCTAATTATCTTAGTGTGTTACTTGAGGCTATTGATATAAGTAATTTGCCAAGTTTTTTGGGTGGTAAATGCACATGTTCTGATTATGGAGGATGCTTAATGAGTGATAGAGGTCCATGGAAAAATCCAGATATAGTAAAAATGATTGAGGTCATATCCTTGAGAGAAGAGATGGATAGTAAAAATGATTCAAATAATGGTGATGTGGCTTCAGAAGATTCTCCCTCGATGCCCAAAAAGGGTGACATGGGAAACCAAAATGACTTTGGTTTTAACCTAGCTCCACTTGATGAGTCAGCATGTGCTGGATCAGACTCAAAATATAAGTTAGCATTGCAAAAAATTAATGGCCTGGAAGCTGCTCTTGGAGACACCAAGAATAAAATCGAGACACTGGAAGAGGCACTTGAGGACGCCAAGATGGCCTTGAAAGAGCTCGCACAAAGTATAATACAGCCGAAGCTATGA 1446 0.4115 MSSVKGKEKEKDVEVVITTRGDTESLTTYSSSSGERAWLHSADGRTKCLHPPIETHWELPSSGAKKPSSSSSSSFKSLFTFPLTKLRRTKSMQTVLEGPRDPKDAQIVESFRRMLFLEGLLPTKHNDYHTLLRFLRMRDFDMLKSKDVFLNYLKWHEEFGVDMLLKEFKYPEYTEVKKCYPHGYHGVDRHGRPVYIERLGMVDLNKLLQVTTFERFIKYHVSEQEKTLRIRYPACSMAAKRHIASTTSILDVNGVGMSNFSKPARYLFMEIQKIDSSYYPEFATSMALQTLHKLFIINAGSGFKMLWKAVKTFLDVRTVAKVQVLGSNYLSVLLEAIDISNLPSFLGGKCTCSDYGGCLMSDRGPWKNPDIVKMIEVISLREEMDSKNDSNNGDVASEDSPSMPKKGDMGNQNDFGFNLAPLDESACAGSDSKYKLALQKINGLEAALGDTKNKIETLEEALEDAKMALKELAQSIIQPKL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01262 481 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 65 385 - -
Arst5g01262 481 SMART CRAL_TRIO_N_2 127 152 IPR011074 -
Arst5g01262 481 MobiDBLite consensus disorder prediction 385 410 - -
Arst5g01262 481 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 172 354 IPR001251 -
Arst5g01262 481 SUPERFAMILY CRAL/TRIO domain 171 375 IPR036865 -
Arst5g01262 481 CDD SEC14 173 349 IPR001251 -
Arst5g01262 481 Pfam CRAL/TRIO domain 180 348 IPR001251 -
Arst5g01262 481 SMART sec14_4 172 351 IPR001251 -
Arst5g01262 481 Coils Coil 441 475 - -
Arst5g01262 481 Gene3D - 160 379 IPR036865 -
Arst5g01262 481 SUPERFAMILY CRAL/TRIO N-terminal domain 98 167 IPR036273 -
Arst5g01262 481 Gene3D - 80 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01262 Arst-Chr5 13466475 13469596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01262 131 345 Acyl Lipid Metabolism Gene Families AT5G47730 27.650 3.56e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01262 K26544 - gmx:100797170 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01262 5 13466475 13469596 Arst5g01262 5 13466475 13469596 ECH