Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01204 ATGTCAGCAGCAAAATCTGAGTTGGTAGAGAAGGCAAGCATAAACGTAGAAAGTAATGATCAATCATCTCCACCTGCTCCTGCAAGCCTTGGGAAGATGGTGGCTTCAGAACTGAGAATTCAACGAGGAATAGCCCTTCCAATGGTGGCCATGAACCTTGCCTGGTTTGCCAAGACAGCCATCACAACAGCATTTCTTGGCCGCCTGGGCGGGCTCAGCTTAGCCGGCGGTGCCCTGGGCTTCACTTTCGCCAACGTAACCGGCTTCTCTGTCCTGAACGGCCTGTGCGGCGCCATGGAACCTATCTGTGGACAAGCTCACGGTGCTAGAAACTTCAAACTCCTCCACAAGACCCTTCTCATGACAATCATATTGCTCCTCTTGGTAACAATTCCCATCACTTTCCTATGGCTCAACGTTGACAAAATCTTAATTCACTTCGGGCAGCACCAAGATATTTCAACGGTGGCCAAAACCTACATCTCATATCTTATACCAGATTTGTTTGTCACCTCGCTCTTCTGCCCCTTAAAATCCTACTTGAGCTCCCAAAGCATAACACTCCCAACCATGTTCAGTTCAGCCGTGGCACTTGCTTTCCACATACCAATCAACATAGTACTCTCAAAAACCATGGGCCTTGAGGGGGTTTCCATGGCGGTTTGGATAACCGATCTTATAGTGGTGGTTCTGCTGGCAATTTACGTAGCCATTCTTGAGAACAGAAAGGGAAGCATGTGGAAGGAAGGGGGGTGGTGGGATCAGAGCATACAAGATTGGATTAGGCTTTTGAAGCTGTGTGGATCATGCTGCCTCAACACATGCTTGGAATGGTGGTGCTATGAGATTCTCATCTTGCTCACCGGCCACCTCACTGACGCTAAAGACTCACTCGGAATTCTCACCATTGTTCTCAACTTCGACTATCTGCTTTTCTCCGTCATGCTGTCCCTGGCCACCTGTGTCTCCACCCGAGTCTCCAACGAGCTCGGGGCCAACCACGCCGTCCCCGCGTACCGGGCGGCGTGTGTTTCTTTGGGATTGGGGTGTGCCTGCGGGTGCATAGGGAGCTTGGTGATGGTGGGGGCAAGAGGAGCCTGGGGGCCTCTGTTTAGCCATGAAAGGGGAATCATAACAGGGGTAAAAAGGACAATGCTGCTGATGGCTCTTGTGGAAGTGTTTAATTTTCCGGTGGCGGTTTGTGGAGGCATACTTAGAGGGACAGCTAGACCATGGTTGGGCATGTATGCTAATTTGGGTGGATTTTACTTCCTTACCCTGCCCCTTGGTGTGCTTTTTGCATTCAAGCTTCACCTTGGGCTTATTGGGCTCTTTATTGGTCTTATTGCCGGTATTGTTATTTGCTTGTTGCTGCTGCTCGTGTTTATTGCAAGGATTAACTGGGAAGTGGAAGCTTCTAAGGCACAGCAACTGGCCACAAAATATGATTCTCAGGAACCAATTCAAAACCATCATGTCTAA 1482 0.4953 MSAAKSELVEKASINVESNDQSSPPAPASLGKMVASELRIQRGIALPMVAMNLAWFAKTAITTAFLGRLGGLSLAGGALGFTFANVTGFSVLNGLCGAMEPICGQAHGARNFKLLHKTLLMTIILLLLVTIPITFLWLNVDKILIHFGQHQDISTVAKTYISYLIPDLFVTSLFCPLKSYLSSQSITLPTMFSSAVALAFHIPINIVLSKTMGLEGVSMAVWITDLIVVVLLAIYVAILENRKGSMWKEGGWWDQSIQDWIRLLKLCGSCCLNTCLEWWCYEILILLTGHLTDAKDSLGILTIVLNFDYLLFSVMLSLATCVSTRVSNELGANHAVPAYRAACVSLGLGCACGCIGSLVMVGARGAWGPLFSHERGIITGVKRTMLLMALVEVFNFPVAVCGGILRGTARPWLGMYANLGGFYFLTLPLGVLFAFKLHLGLIGLFIGLIAGIVICLLLLLVFIARINWEVEASKAQQLATKYDSQEPIQNHHV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01204 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 32 468 - -
Arst5g01204 493 Pfam MatE 47 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g01204 493 Pfam MatE 270 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g01204 493 CDD MATE_eukaryotic 37 474 IPR045069 GO:0042910|GO:1990961
Arst5g01204 493 NCBIfam MATE family efflux transporter 47 444 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01204 Arst-Chr5 12521476 12523349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01204 K03327 - gmx:100804083 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01204 5 12521476 12523349 Arst5g01204 5 12521476 12523349 ECH