Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01201 TCTCAGGCAGTTAAGCGAAATTCAGTGGCTATTGTGGACATTCTGAAGCAGGCAAATTCATTCCTTCCTCATGTAGTCCTTGGCAGCACGCTGCTAGCTCTAATCTTCCCACCTTCATTTACCTGGTTTACCACCAGATACTATGCACCTGCACTAGGGTTTTTGATGTTTGCAGTGGGGGTAAATTCAAGTGAAAAGGACTTCGTTGAAGCTTTTAACAGGCCAGTAGAAATTGTAGTTGGTTATGTTGGCCAGTTTGTCATGAAGCCCCTTCTAGGGTATCTGTTTTCCCTAATTTCTGTAACTGTATTTGGTCTACCAACACCCATAGGCGCAGGAATTGCATTGGTGTCTTGTGTTAGTGGAGCGCAGCTCTCGAATTACGCTACTTTCCTCACCGATCCACAGATGGCACCATTAAGCATAGTTATGACATCCCTGTCTACTGCATCTGCGGTTTTTGTGACGCCCCTGTTATCGCTTTTGCTCATTGGAAAGAGACTGCCTGTAGATGTAAAAGGAATGGTGTTTAGCATTACACAGATTGTGGTGGCTCCTATTGCTCTTGGCCTGCTTCTAAACCGCTTCCTTCCTCGTATCTGTAATGCTATTCGACCGTTTTTACCTCCACTGTCAGTATTTGTGACGGCTCTCTGTGTTGGAGCTCCTCTTGCAATTAACATTGAGGCTGTTAAATCCCCATTTGGAGCTTCTATCCTGTTGCTTGTTGTTGGTTTTCATTTGGCTGCATTTGTAGTTGGTTATATCTTAAGTGGATTTGTCTTCCATGATTCTCCTGATGTAAAGGCATTGCAGCGAACAATTTCCTTTGAGACAGGTACGAGTNNNNNNCTTCTTGCTCTGGCCCTTGCTAATCGATTCTTCGAAGATCAACTAGTCAGTGTGCCTCCTGCAATTTCTACTGTAATAATGTCTTTGATGGGATTTTCTCTTGTGATGATTTGGGCCAAGAGGAAAGAGATTATTGCCATGGCTTTGGTCTGGCAATACGGCGAAAAATCCGGTCATCAAGCCTGGAAGGGCCTTTCTTGGGGTATGGTACCTCTTCTTGGTGGAGCACTTTGTGCATGTACATGGCATTTCTTTTATAACTCTGAGTCCCTCGAGGTATTGGTGGCACTTCAAGCGGCACTTACCGTTATTGGTAACTTCACAATGTGCATTGCTGCTTACAGGATATACAAATCGTCCAGCGAAGGATCCAAGAATTTTTGA 1236 0.4409 SQAVKRNSVAIVDILKQANSFLPHVVLGSTLLALIFPPSFTWFTTRYYAPALGFLMFAVGVNSSEKDFVEAFNRPVEIVVGYVGQFVMKPLLGYLFSLISVTVFGLPTPIGAGIALVSCVSGAQLSNYATFLTDPQMAPLSIVMTSLSTASAVFVTPLLSLLLIGKRLPVDVKGMVFSITQIVVAPIALGLLLNRFLPRICNAIRPFLPPLSVFVTALCVGAPLAINIEAVKSPFGASILLLVVGFHLAAFVVGYILSGFVFHDSPDVKALQRTISFETGTSXXLLALALANRFFEDQLVSVPPAISTVIMSLMGFSLVMIWAKRKEIIAMALVWQYGEKSGHQAWKGLSWGMVPLLGGALCACTWHFFYNSESLEVLVALQAALTVIGNFTMCIAAYRIYKSSSEGSKNF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01201 411 PANTHER SODIUM-BILE ACID COTRANSPORTER 7 327 IPR004710 -
Arst5g01201 411 Gene3D - 7 326 IPR038770 -
Arst5g01201 411 Pfam Protein of unknown function (DUF2499) 328 398 IPR019634 -
Arst5g01201 411 Pfam Sodium Bile acid symporter family 50 232 IPR002657 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01201 Arst-Chr5 12462067 12468607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01201 10 327 Organic Solute Cotransporters AT4G22840 71.698 9.70e-167 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01201 - - vvi:100263268 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01201 5 12462067 12468607 Arst5g01201 5 12462067 12468607 ECH