Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01198 ATGAGAGTGATAGTGCCATTGCAAGGAGTCGTTCAAGGCAAAGGAGGTCTCTTCTGGGGTTCCGTCATCCCCTGCGCCCTCTTCTACTTCTTCCAGCTCTACTTCAAGAACCGCCGCCACCACCACCGTTCTCCTCCTCCTCCGCCACCACCACCACCACCACATCATGTCCAAGTCTTGCCCCGCTCTCTTTCCAGGATCCTTCTGTCTCCCAGAAGCCCTGCCGGACCCGCTTACGTGTCAGGCCGCGCCACCTCTGTCGCCAGAATCTCCGCTGACTCTCCTTACTATGTTGGTTTGCGCAAGGCGGCTGAGGATCCCTACCACGAGGTTCATAATCCTCATGGTGTTATTCAGCTTGGTTTGGCACATAACACGTTGTCTCAGGACTTGGTCCACGATTGGATTCACCAGAATGGAACCACTGCAATTTTAGGCAGAGGAATTGCACCTTACCAACCCCTTGATGGATTCATGGAACTCAAACTGGCTGTGGCTGGTTTCATGCCTCAAGTTATGGAAAAGCCAATTTTCTTCAGTCCCTCACAAATGGTACTAACTGCTGGTGCCACCTCTGCCATTGACATTCTTAGCTTCTGCTTAGCAGATCATGGAAATTCATTCCTTGTTCCAACACCTCACAGCCCTAGCTTTGATGGGGATATAAAATGGCGAAGTGACATCGAGATAGTAGCTGTTCCCTGCCGCAGCACTGATAACTTCAATCTGAGTATAACTGCTCTTGACCGGGCCTTTAACCAGGCAAAGAAACGGGGACAAAAAGTTCGAGGAATCATCATAACGAATCCTTCAAATCCTGTTGGAAAATTATTGGACCGGGAAACACTACTTGATATTGTGGACTTTGCTAGAGAGAAGAATATCCACATAGTCTCCAATGAAACATTTGCAGGGTCTGCTTGTGGAAGCAAAGAGTTTGTGAGCATGGTGGAAATCCTGGAAGCCGAAGAACTTGATCGCGACAGAGTTCATATAATATATAGTTTATCAAATGAACTCTCTGTTCCAGATTTTAAGGTTGGTGTCCTCTACTCCTACAATGAGAACGTCCTAGTTGCTGCTAGAAGAATGGCAAAGTTCTCAGCTCTTTCTGCTCCCACTCAGCAATTGCTTATCTCCATTCTTTCAGATACTAGATTTGTACAGAAATTCATTGAGATCAACAGACTGAGGCTTCGAAAAATGTATAACACATTTGTGGCAGAATTGAAGCAGTTAGGAATCGAGTGCACTAGCAGCAGCGGTGGTTTTTACTGTTGGGCCAACATGAGTAAATTACTCCGGTCTTACGGCGAAAAGGGAGAGCTTGAGCTCTGGGACAGATTGTTGAATGTGGCTAAGATCAATGTTACTCCAGGATCATCTTGTCACTGTATTGAACCAGGATGGTTTCGTTTTTGTTTCACTACATTGTCTGAAAAAGATGTTTCTGTAGTCATGGAACGGATTCGGCGAATCTCTGCAGCCACAAAATCAGAGAGTTGA 1506 0.4641 MRVIVPLQGVVQGKGGLFWGSVIPCALFYFFQLYFKNRRHHHRSPPPPPPPPPPHHVQVLPRSLSRILLSPRSPAGPAYVSGRATSVARISADSPYYVGLRKAAEDPYHEVHNPHGVIQLGLAHNTLSQDLVHDWIHQNGTTAILGRGIAPYQPLDGFMELKLAVAGFMPQVMEKPIFFSPSQMVLTAGATSAIDILSFCLADHGNSFLVPTPHSPSFDGDIKWRSDIEIVAVPCRSTDNFNLSITALDRAFNQAKKRGQKVRGIIITNPSNPVGKLLDRETLLDIVDFAREKNIHIVSNETFAGSACGSKEFVSMVEILEAEELDRDRVHIIYSLSNELSVPDFKVGVLYSYNENVLVAARRMAKFSALSAPTQQLLISILSDTRFVQKFIEINRLRLRKMYNTFVAELKQLGIECTSSSGGFYCWANMSKLLRSYGEKGELELWDRLLNVAKINVTPGSSCHCIEPGWFRFCFTTLSEKDVSVVMERIRRISAATKSES 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01198 501 Gene3D Aspartate Aminotransferase, domain 1 106 489 IPR015422 GO:0003824
Arst5g01198 501 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 80 492 - -
Arst5g01198 501 Pfam Aminotransferase class I and II 118 490 IPR004839 GO:0009058|GO:0030170
Arst5g01198 501 SUPERFAMILY PLP-dependent transferases 94 493 IPR015424 -
Arst5g01198 501 CDD AAT_like 152 492 - -
Arst5g01198 501 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 120 146 - -
Arst5g01198 501 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 205 226 - -
Arst5g01198 501 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 259 283 - -
Arst5g01198 501 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 329 353 - -
Arst5g01198 501 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 361 384 - -
Arst5g01198 501 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 295 318 - -
Arst5g01198 501 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 183 203 - -
Arst5g01198 501 Gene3D - 140 384 IPR015421 GO:0003824
Arst5g01198 501 SUPERFAMILY Formin homology 2 domain (FH2 domain) 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01198 Arst-Chr5 12400847 12404274 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01198 K14270 - gmx:100783490 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01198 5 12400847 12404274 Arst5g01198 5 12400847 12404274 ECH