Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01184 ATGTCTTCTGATAGTGCAAAGGAAAATGCATCCGTAGTTGATTCTTCGCTCACTGAATGGAAGCATGACATTGGAAATTCAGATGACCCAGGTATGAGTATGACAACTGGAACTGGAGTGGAAAGCATATATAATACAAAATATTTTATCATTAAGAGTTTAAATCATCAAAACATCCGTTTATCAGTTGAGAAAGGAATTTGGGCTACTCAAGTCATGAATGAACCCATTTTGGAAGAAGCTTTTCATAATTCAGATAGTGTAATCCTTATATTTAGTGTCAACATGAGTGGCTGCTTCCAAGGATATGCACAAATGACTTCCTCCATTGGGTGGAGGAGAGATAATGTTTGGAATGAGGGTAGTGGTAAGGGTAATCCTTGGGGTCGCAGTTTTAATGTCAAATGGCTGCGTTTAAATGACCTTCCCTTTCATAAGACTCTTCATCTGAAGAATCCCTTGAATGACTACAAACCTGTCAAAATTAGTAGAGATTGCCAGGAGTTATCACCAGATATTGGTCTTGCTCTTTGTGAACTCCTTGACGGTAAAAACGAGGTGGATGGCCTGCTGACGAGTTCATCCACAGATGACTTATATTGGAAAGGGCATCATTCAAAGACATCAGGGGGTTTTGCGGGAGGTGAAGACTATAACTTCCATCCACTCCATTTATCATGGTCAATGTCCCTGCCATACTCTTCCATGCTTTACCAAAATCAAGCTGAGTTAAGTCAATTTCATTCAGCAAGCAATAGATTCAGTGGGACAACAATCACCAAAAGATTGCCTACCACCACTGTGTCATCAAAAGTGTCAGGGACTAAACATGCTCGTTTTAGTTCCTTAACAGAAGATGATTTTCTTGACATGTCCTATGAAGAATACTTGGAGATCCATAGCAGATGCAGGAAACAATTGTGCCTCGGTGCAGCTCAACCATCTTTCAAACAGACGGAATCATTGAGAAGTAATTCGCATGGTGATTATAGCAATTTGGACGAGTTTGATAGAGACAGGACCAGCTCTCAAAGGAGCAATCAGTAA 1047 0.4031 MSSDSAKENASVVDSSLTEWKHDIGNSDDPGMSMTTGTGVESIYNTKYFIIKSLNHQNIRLSVEKGIWATQVMNEPILEEAFHNSDSVILIFSVNMSGCFQGYAQMTSSIGWRRDNVWNEGSGKGNPWGRSFNVKWLRLNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKNEVDGLLTSSSTDDLYWKGHHSKTSGGFAGGEDYNFHPLHLSWSMSLPYSSMLYQNQAELSQFHSASNRFSGTTITKRLPTTTVSSKVSGTKHARFSSLTEDDFLDMSYEEYLEIHSRCRKQLCLGAAQPSFKQTESLRSNSHGDYSNLDEFDRDRTSSQRSNQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01184 348 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 42 183 IPR045168 -
Arst5g01184 348 Gene3D ph1033 like domains 30 193 - -
Arst5g01184 348 MobiDBLite consensus disorder prediction 330 348 - -
Arst5g01184 348 ProSiteProfiles YTH domain profile. 46 181 IPR007275 GO:0003723
Arst5g01184 348 MobiDBLite consensus disorder prediction 318 348 - -
Arst5g01184 348 CDD YTH 47 181 IPR007275 GO:0003723
Arst5g01184 348 Pfam YT521-B-like domain 47 181 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01184 Arst-Chr5 12264133 12267896 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01184 K20100 - gmx:100784130 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01184 5 12264133 12267896 Arst5g01184 5 12264133 12267896 ECH