Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01171 ATGTCCTTTCGGAACAAAAGAATAATGGAAGGATCTCTTTTTGACGTTCATAGAGCTGAACCATCCCAGGAAACAATGGCAGTGCCATCATTAGATATGCAGCGGGCAGAGTCATCCCAGAAGCATGTGAGAGCCTTAAACACCCAGTTTGCAAGCTGGGTTCAAACACAATTACAGAATCACCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTAGAACATGCTGCAGGCATTATGGAAAAGTTTAGTGATGTTGTAAACTGGATCAAAGCAAATGCCACCAAGGGGGAAAATTTGCCTGATGTTGGTGCTTCTTTTGCCGGGAAAAAATTATCTCCAGATGTGACTAATAAAGAAAATAAAACTTCTGGAGAAAAAACTGGGTCTACTACAGCTAGTCCTGCTTCAAATTTTGCTAGTCCTGCTATGAGTTTTGGCAGTCCTGCTATGAATTTTGGCAGTCCTGCTACAAATTTTGCTAGTCCTGCTACAAATTTTGCTAGTCCTGTTACAAATTTTGCTACTCCTCTGCCAAACTTTGCTTCTTCTGCTGCGAACGCTGCTTCTTCTGCTGCAAACTTTGCCACTCCTGCTACTTCATGGGGTGCTGGATTATTCTCAAACAGTCAAAAACCTTTTACATTTGGTACTCAAAATTCGGCTCCCTCTAATAATGATGCTTCAGATGATGTAGATGGTGAAAATGACTTGGAGCAGCCCAGCAGTCCATCAGTGAAGAAGTCAGAAGAGAAAGGTATCATAGTTGTGCATGAAGTGAAGTGCAAACTATTTGTAAAGTCAAGTGATACAGATGTTAAGAATGTATGGAAAGATAAAGGAATGGGTCAACTATGTATTAAATGCAAAGAAGGTGTCAGCAAGGCTACCAAGGAGTCCAAACCAACAATCATTGTTCGAAATGAGGTAGGGAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATAAAGACGCATCTACAGAAGAATACTCTTGTTGCTATATTCCACACGTCGGATATTGCTGATGGAAGTGGTGGAAATAATGATAGCGTTGTTGCACGCACCTTCTTGATAAAAGTGAAAACAGAAGAAGATAGAAATAAATTGGCATCAATAATCCAAGAATATGCTCCAGTATCTTGA 1149 0.4047 MSFRNKRIMEGSLFDVHRAEPSQETMAVPSLDMQRAESSQKHVRALNTQFASWVQTQLQNHPDELWEDGVRDYLEHAAGIMEKFSDVVNWIKANATKGENLPDVGASFAGKKLSPDVTNKENKTSGEKTGSTTASPASNFASPAMSFGSPAMNFGSPATNFASPATNFASPVTNFATPLPNFASSAANAASSAANFATPATSWGAGLFSNSQKPFTFGTQNSAPSNNDASDDVDGENDLEQPSSPSVKKSEEKGIIVVHEVKCKLFVKSSDTDVKNVWKDKGMGQLCIKCKEGVSKATKESKPTIIVRNEVGKILLNALLYPGIKTHLQKNTLVAIFHTSDIADGSGGNNDSVVARTFLIKVKTEEDRNKLASIIQEYAPVS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01171 382 MobiDBLite consensus disorder prediction 124 139 - -
Arst5g01171 382 CDD RanBD_NUP50 251 379 - -
Arst5g01171 382 MobiDBLite consensus disorder prediction 109 139 - -
Arst5g01171 382 PANTHER RAN BINDING PROTEIN 6 379 IPR045255 -
Arst5g01171 382 ProSiteProfiles Ran binding domain type 1 profile. 249 377 IPR000156 GO:0046907
Arst5g01171 382 MobiDBLite consensus disorder prediction 215 230 - -
Arst5g01171 382 Gene3D - 103 381 IPR011993 -
Arst5g01171 382 MobiDBLite consensus disorder prediction 215 251 - -
Arst5g01171 382 SUPERFAMILY PH domain-like 249 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01171 Arst-Chr5 12127342 12131310 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01171 K14295 - gmx:100816975 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01171 5 12127342 12131310 Arst5g01171 5 12127342 12131310 ECH