Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01129 ATGTCGTCCACCGGATCCGGATCCGCCCCCAACGGCGAAGCCACTCCGCCGTCGCAACGCAAGGTGGCTCTGATAACCGGAATCACGGGTCAGGACGGTTCCTACCTGACGGAATTCTTGATGGAGAAGGGTTACGAGGTGCACGGCCTCATCCGCCGTTCCTCCAACTTCAACACGCAGCGGATCGAGCACATATACGTGGACCCACACAACGCCCACAAAGCACGCATGAAGCTCCACTACGCCGACCTCTCCGACGCCTCCTCCCTCCGCCGATGGCTCGACACCATCCTCCTCGACAAGGTCTACAACCTCGCCGCCCAGTCCCACGTCGCCGTCTCCTTCGAGATCCCCGACTACACCGCCGACGTCGTCGCCACCGGGGCCCTCCGCCTTCTGGAGGCCGTGCGCTCCCACATCTCCGCCACCGGGCGCTCGCACATCCGGTATTACCAGGCGGGATCCTCGGAGATGTTCGGGTCCACACCACCGCCTCAGGACGAGACCACACCGTTTCACCCGAGATCCCCTTACGCTGCATCCAAGTGCGCGGCGCACTGGTACACCGTCAATTACCGCGAGGCCTACGGGATCTTCGCCTGCAACGGCATCCTCTTCAACCACGAGTCTCCTCGCAGAGGTGAGAATTTTGTGACGCGCAAGATCACGCGGGCCGTGGGCCGGATCAAGATCGGGCTTCAGAGAAAGCTCTTCTTGGGGAATCTTCAGGCTTCTAGGGATTGGGGTTTCGCGGGGGATTACGTGGAGGCTATGTGGCTGATGCTGCAGCAGGAGAAGCCCGACGACTATGTGGTGGCCACGGAGGAGTCTCACACCGTCGAAGAGTTCCTGGAGGTGGCGTTCGGTCATGTGGGCCTGAATTGGAGGGACCATGTTGCTATTGACAAGAGGTATTTTAGGCCCACTGAGGTGGATAACCTCAAGGGTGATGCTACAAAGGCCAAGAAGGTGCTTGGGTGGAAGCCCAGGGTGGGCTTTGAGCAGCTCGTCAAGATGATGGTCGATCAGGATGTTGAGTTGGCTAAGAAGGAGAAGGTTCTTGTTGATGCTGGCTACATTGATGCTCAGCAACAACCTTGA 1101 0.594 MSSTGSGSAPNGEATPPSQRKVALITGITGQDGSYLTEFLMEKGYEVHGLIRRSSNFNTQRIEHIYVDPHNAHKARMKLHYADLSDASSLRRWLDTILLDKVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHISATGRSHIRYYQAGSSEMFGSTPPPQDETTPFHPRSPYAASKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQRKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEVAFGHVGLNWRDHVAIDKRYFRPTEVDNLKGDATKAKKVLGWKPRVGFEQLVKMMVDQDVELAKKEKVLVDAGYIDAQQQP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01129 366 CDD GDP_MD_SDR_e 22 346 - -
Arst5g01129 366 NCBIfam GDP-mannose 4,6-dehydratase 21 347 IPR006368 GO:0008446|GO:0019673
Arst5g01129 366 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 13 356 IPR006368 GO:0008446|GO:0019673
Arst5g01129 366 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 21 346 IPR036291 -
Arst5g01129 366 FunFam GDP-mannose 4,6-dehydratase 24 222 - -
Arst5g01129 366 Gene3D - 24 330 - -
Arst5g01129 366 Hamap GDP-mannose 4,6-dehydratase [gmd]. 21 350 IPR006368 GO:0008446|GO:0019673
Arst5g01129 366 Gene3D - 214 340 - -
Arst5g01129 366 Pfam GDP-mannose 4,6 dehydratase 24 340 IPR016040 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01129 24 206 Miscellaneous Gene Families AT4G12250 28.796 5.19e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01129 K01711 - gmx:100777692 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01129 5 11489315 11490930 Arst5g01129 5 11489315 11490930 ECH