Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01110 ATGGACCAACCGCTACAACAACAACAAACCACCACCGCCGAGGTCGTTAGGGATTCCGATTCGCAGCTTTCTGGAGTTCCCTCCGATGCTAACGTGGCCGAGAGAATAGCGGCCTCTGCCTGCGCTCCCAACTCGGAGGTCGCCGTGCCGGACGCCGCTGGTTTGAAGAGGAAGCGCGGTCGTCCGGCCAGGGGGGTTCCGAGAGCCACGCCGGCTCCTGCTCCGGTTAGGCAGAAGAAGGAGGAGGAGGATGTTTGCTTCATATGCTTCGATGGCGGAAGCCTCGTTCTCTGTGATCGCCGGGGTTGTCCTAAAGCGTATCATCCTGCTTGTATTAAGCGAGACGAAGCCTTCTTTCGTTCAAAGGCCAAATGGAATTGCGGTTGGCATATATGTAGCGTTTGTCAGAAGGGATCCCATTATATGTGCTATACTTGTACGTATTCTTTGTGCAAGGGATGTACAAGAGATGCTGATTTTGTTAGTGTAAGAGGAAATAAAGGATTCTGTGGAATGTGCATGAAAACTATAATGCTGGTTGAGAACCCTGGTCAGGAAAATAAGTGTGAAGTTGATTTTGATGACAAAACCAGCTGGGAGTATCTTTTCAAGATCTATTGGGTGTGTTTGAAAGAGAAGCTATCTTTGACAGTAGATGAGCTCCGCCAAGCTAAAAAACCGTGGAAAAGTGCTACTCCTTTAAGTTGTAAGGTTGAAACTCCCCATCAACTTTATCATCTTAAGGACGACAAAGGTGCTGCTTCTGAGAACTCTTGTATAGACATAGAATTTGATCATTTGACAGACAATAAGCCTAAGAGAAGTGAGAAACAAATATTTATTTGGGATGGTACCTGGAATGATGTTAGATACCGTACACAAGACATTCCAGTTACCCGTGAGCTGATTGGAAACATATGTACAATGCCAAACCAGGTCAACCCTAATGTTGTAGCTGTTAATAATACTAATGTAGTTGTAAAATCAGAACCATCTAGTGCTGCAGTGGACATTTCGTCATTACTTCTCTCTACGGGGATGGAGCAGCCGTTTGACAATTTTGTGAACGATAAGTTGTGGCATTATCAGGATCCATCTGGGATGGTTCAAGGACCCTTTTCTATACTGCAGTTGCATAAGTGGAATGCAAGTGGACATTTTCCTCTGGACCTCAGAATATGGAGGACATATGAGACACAAGATAACTCTATATTGTTGGCTGATGCACTTGTTGGGAAGTGTGCCAAAAATGTATCTGTGCCATACAACAGCCCGATGTCTTTAGAGTCCTGTGTTACATTGGATAATAAAGATAACATTCAGGATGGTGGGAGGAATGAAACAAGGGCGGAAATTCATGCTGACAGCCGAATTATCAATTCCGGTGGAGCTGAGAAGGTTGATGATGCTGGTACCCCGTCTAACTGTAAAGATGAATCTGTTAGGAGCAATGGTTTGCAGTCTCATTCTTCTAGTTGGAATATGGCAGTCGACATGAATGAGGGGCAAAGTGGAAATCTTGAAAGGAGAGAGGAGTCGTCCAAATGTGAAATTTTGAATCCCAACCAGCCCGATTTGCTACCTTCAACCACCTTTTCGAAGAAACCAAATGAAAGCTCTCCTGATACAGTACAGGAAGGTCATGGAGTTGAGGGGAACACTGAAGATAATGTGAACCATTGCCAGAACAGGACTCCTGAAGGTCAGAGTAGTGGGAGTTACCAGAAAGACTGTGAGGAGAATTCAGGGCAGTCTTCTGGGCAGAACTGGGAATGCCCTCAAGTAATTAATCCAACGTGTAATACATCTATGTGGCAGGCAATCTTTGGTGAACCCGCCGAATTTGGCTCTTTAGTTGACGAATCAGTCTCTGATCTGTTGGCTGAAGTAGAGGCAATGGAGTCACTTGGTGGTGGTGGTTTGGAGTCTCCCACTTCAATCATGAAGTGTGATGATGAATTGACAGATGGTTCTAAAAATGATTGTCTCAGTTTTGCACTTGGCCTTGGCCTTGGCCCCATGCTTGATGCAGGGAAAGGTGATTCATTGAGCTCAACAGGTGACTTACACTTACCATCGCAGTTCACGACAGCAGAAGAACCATTTCGGCATGCTGGTGTGCACCAACATCATCAAAGAATACGCGGGGATCATTCTTCTAGCAGTTCTGTAGTTCAGTCTACTTTCTCGAGCATTAGCTGGAATCCAACCAGTCAATACTCCTGGGATCCTAAATGTTGA 2241 0.4534 MDQPLQQQQTTTAEVVRDSDSQLSGVPSDANVAERIAASACAPNSEVAVPDAAGLKRKRGRPARGVPRATPAPAPVRQKKEEEDVCFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFRSKAKWNCGWHICSVCQKGSHYMCYTCTYSLCKGCTRDADFVSVRGNKGFCGMCMKTIMLVENPGQENKCEVDFDDKTSWEYLFKIYWVCLKEKLSLTVDELRQAKKPWKSATPLSCKVETPHQLYHLKDDKGAASENSCIDIEFDHLTDNKPKRSEKQIFIWDGTWNDVRYRTQDIPVTRELIGNICTMPNQVNPNVVAVNNTNVVVKSEPSSAAVDISSLLLSTGMEQPFDNFVNDKLWHYQDPSGMVQGPFSILQLHKWNASGHFPLDLRIWRTYETQDNSILLADALVGKCAKNVSVPYNSPMSLESCVTLDNKDNIQDGGRNETRAEIHADSRIINSGGAEKVDDAGTPSNCKDESVRSNGLQSHSSSWNMAVDMNEGQSGNLERREESSKCEILNPNQPDLLPSTTFSKKPNESSPDTVQEGHGVEGNTEDNVNHCQNRTPEGQSSGSYQKDCEENSGQSSGQNWECPQVINPTCNTSMWQAIFGEPAEFGSLVDESVSDLLAEVEAMESLGGGGLESPTSIMKCDDELTDGSKNDCLSFALGLGLGPMLDAGKGDSLSSTGDLHLPSQFTTAEEPFRHAGVHQHHQRIRGDHSSSSSVVQSTFSSISWNPTSQYSWDPKC 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01110 746 ProSitePatterns Zinc finger PHD-type signature. 86 146 IPR019786 -
Arst5g01110 746 SMART gyf_5 358 413 IPR003169 GO:0005515
Arst5g01110 746 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 176 IPR013083 -
Arst5g01110 746 MobiDBLite consensus disorder prediction 462 590 - -
Arst5g01110 746 MobiDBLite consensus disorder prediction 1 29 - -
Arst5g01110 746 SUPERFAMILY GYF domain 355 409 IPR035445 -
Arst5g01110 746 ProSiteProfiles GYF domain profile. 357 411 IPR003169 GO:0005515
Arst5g01110 746 SUPERFAMILY FYVE/PHD zinc finger 57 130 IPR011011 -
Arst5g01110 746 CDD GYF 357 410 IPR003169 GO:0005515
Arst5g01110 746 SMART PHD_3 85 131 IPR001965 -
Arst5g01110 746 CDD PHD5_NSD 85 130 - -
Arst5g01110 746 ProSiteProfiles Zinc finger PHD-type profile. 83 149 IPR019787 -
Arst5g01110 746 Pfam GYF domain 360 400 IPR003169 GO:0005515
Arst5g01110 746 FunFam Zinc finger CCCH domain-containing protein 19 75 175 - -
Arst5g01110 746 MobiDBLite consensus disorder prediction 1 28 - -
Arst5g01110 746 MobiDBLite consensus disorder prediction 517 590 - -
Arst5g01110 746 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 598 738 - -
Arst5g01110 746 MobiDBLite consensus disorder prediction 476 501 - -
Arst5g01110 746 MobiDBLite consensus disorder prediction 43 76 - -
Arst5g01110 746 Gene3D - 359 413 IPR035445 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01110 Arst-Chr5 11188081 11191961 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01110 - - aip:107642933 1459.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01110 5 11188081 11191961 Arst5g01110 5 11188081 11191961 ECH