Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01098 ATGACTAGTTCCTCCGCTGCCGCTCGCAAGAATCTGAGTAAGATTGCCTGCAATAGGCTTCAGAAAGAGCTTGTCGAGTGGCAGGTCAATCCCCCAACTGGTTTCAAGCACAAAGTCACCGACAATCTTCAAAGGTGGGTTATTGAAGTCTCTGGAGCTCCTGGCACACTTTACGCTAATGAGACCTACCAGCTTCAGGTTGATTTTCCAGAGAATTACCCCATGGAAGCTCCACAGGTCATATTTTTGCATCCTGCTCCACTGCATCCTCATATTTACAGCAACGGCCATATTTGTTTAGATATATTGTATGATTCATGGTCCCCAGCTATGACAGTTAGTTCCATCTGCATCAGCATTCTCTCAATGCTTTCAAGCTCAACTGTAAAGCAACGCCCGGAAGATAATGATCGCTATGTAAAGAACTGCAGAAACGGGAGATCGCCGAGGAGACAAGGTGGTGGTTCCATGATGATAAAGTATAGTAACTAG 492 0.4553 MTSSSAAARKNLSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVSGAPGTLYANETYQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTVKQRPEDNDRYVKNCRNGRSPRRQGGGSMMIKYSN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01098 163 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 88 103 IPR023313 -
Arst5g01098 163 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 15 163 IPR000608 -
Arst5g01098 163 FunFam probable ubiquitin-conjugating enzyme E2 16 13 153 - -
Arst5g01098 163 Pfam Ubiquitin-conjugating enzyme 19 147 IPR000608 -
Arst5g01098 163 Gene3D Ubiquitin Conjugating Enzyme 15 152 IPR016135 -
Arst5g01098 163 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 15 135 - -
Arst5g01098 163 MobiDBLite consensus disorder prediction 143 163 - -
Arst5g01098 163 CDD UBCc 17 117 IPR000608 -
Arst5g01098 163 SMART ubc_7 18 163 - -
Arst5g01098 163 SUPERFAMILY UBC-like 6 126 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01098 Arst-Chr5 10898320 10900719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01098 1 112 Miscellaneous Gene Families AT2G33770 26.957 4.64e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01098 K10688 - gmx:100785024 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01098 5 10898320 10900719 Arst5g01098 5 10898320 10900719 ECH