Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01094 ATGCTTGGAGCCCCAAGGCGCGTCCTTGGGTTAATCCCCTATAGTCTACAAAAACTGTCACCGCGGCAACTGCACCACCACGATGTCAACAATGGTGGCGGTGGCAATAGTGAAAAAGAAGAGAGCTTTCGTTTCTACAAGAGCAGAGGTCAACACATTCTCGTCAACCCTCGAATTCTCGACACCATCGTTCGGAGGTCCGCTATCAATCCCACTGACACTGTCCTCGAGATAGGACCCGGCACCGGCAACCTCACCCTCAAGCTTCTAGAAGCCGCCCACAGGGTCGTCGCCGTCGAGATCGACGATCGTATGGTACATGTACTCGAGAAGCGCGTCCTACAACACGGCCTCCGCCACAAGCTCAACGTTATACAAAAAGATGCGTTGCGAATACTATTCCCACACTTTGATCTCGTGGTGGCGAACATTCCTTATGGGATTTCGTCACCTCTTCTGATGAAACTGGTGTATGGAGCATGCCCATTTAGGAGTGCAACTCTTCTGCTTCAGAAGGAGTTTGCTGGAAGGTTACTGGCCAATCCCGGTGACTCTGAGTTCAACCGATTGGCGGTGAACGTGAAGCTTGTGGCTGACGTGGAGTTTGTCATGGATGTTAGCAAGAGGGACTTTCTGCCATGCCCCAAAGTTGATTCCTCTGTTGTCATAATCCGCCCCAAGGATCAGGTTCCAGATGTTGATATGCGTGAGTGGAGGGCCTTCACCAGGACTTGTTTTAGCAGGAAGAACAAGACACTTGGGGCCACCTTTAAGCAAAAGTCCAAACTTTTAAGCTTGTCCAAACTGTCCAATGTATCTGGTTTTGCCGAAGAAGAAGAAGAAGATGATGATGATCATGACCATGACGAAGGGGGGTCTCAGAGGTCTTTTAAGGAAAAGATTATTGGGGTGCTTAAAACGGGAGGGTATGAAGACAAACGGCCTTCCAAACTTTCTATTGAGGAATTGCTGCATTTGCTCTCATTGTTCAATGGAGCTGGCATATATTTTCATGACTGTCGCAAGAACTCTAATGAAGATAGATTTGATGAAGATGATGGCTAG 1065 0.4845 MLGAPRRVLGLIPYSLQKLSPRQLHHHDVNNGGGGNSEKEESFRFYKSRGQHILVNPRILDTIVRRSAINPTDTVLEIGPGTGNLTLKLLEAAHRVVAVEIDDRMVHVLEKRVLQHGLRHKLNVIQKDALRILFPHFDLVVANIPYGISSPLLMKLVYGACPFRSATLLLQKEFAGRLLANPGDSEFNRLAVNVKLVADVEFVMDVSKRDFLPCPKVDSSVVIIRPKDQVPDVDMREWRAFTRTCFSRKNKTLGATFKQKSKLLSLSKLSNVSGFAEEEEEDDDDHDHDEGGSQRSFKEKIIGVLKTGGYEDKRPSKLSIEELLHLLSLFNGAGIYFHDCRKNSNEDRFDEDDG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01094 354 SMART rADcneu6 59 228 IPR020598 GO:0000154|GO:0000179|GO:0008649
Arst5g01094 354 FunFam rRNA adenine N(6)-methyltransferase 45 229 - -
Arst5g01094 354 CDD AdoMet_MTases 74 157 - -
Arst5g01094 354 Gene3D Vaccinia Virus protein VP39 45 230 IPR029063 -
Arst5g01094 354 Pfam Ribosomal RNA adenine dimethylase 44 260 IPR001737 -
Arst5g01094 354 ProSiteProfiles rRNA adenine N(6)-methyltransferase family profile. 45 334 IPR001737 -
Arst5g01094 354 NCBIfam 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA 43 328 IPR011530 GO:0000179|GO:0006364
Arst5g01094 354 Gene3D - 231 338 - -
Arst5g01094 354 ProSitePatterns Ribosomal RNA adenine dimethylases signature. 75 102 IPR020596 GO:0000154|GO:0000179|GO:0008649
Arst5g01094 354 PANTHER DIMETHYLADENOSINE TRANSFERASE 39 331 IPR001737 -
Arst5g01094 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 40 331 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01094 Arst-Chr5 10867089 10868553 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01094 K14191 - gmx:100790908 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01094 5 10867089 10868553 Arst5g01094 5 10867089 10868553 ECH