Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01071 ATGAGGAAGAAAGCCATGAATGCATCAAACGGGCTGAGGAATTCTCTGACGAAAAAGGGCAGGCGGAGCAGCAAGGTTATGTCCATTGAAATTGAGGACGTCCACGATGAGGAGGAGATGAAACATGTCGACGAGTTCCGCCAAGCTCTTATCTTGGATGAACTACTTCCTGCAAAGCACGATGATTATCACATGATGCTTAGATTCCTCAAGGCGAGGAAATTTGATATCGAGAAAACAAAGCTAATGTGGTCTAACATGCTCAAGTGGAGGAAGGAATTTGGTTCGGACACTATTGTAGAGGAGTTTGAATTCAAGGAAATCAATGAAGTGATTAAGTATTATCCGCATGGACACCATGGAGTGGACAAAGATGGACGTCCTGTGTATATAGAAAGATTGGGACAAGTGGATGCCACCAAGCTGATGCAAGTCACAACCATGGATCGTTACATCAAGTACCATGTCCAAGAGTTTGAGAAGACTTTTGATATCAAGTTTCCAGCTTGCTCCATTGCTGCAAGGAAGCAAATCGACCAAAGTACAACAATCCTTGATGTCCAAGGAGTGGGTCTTAAAAACTTCAACAAGAATGCTAGGGAACTTGTCACTCGCCTTCAGCAGATTGACGGTGACAACTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCAGGTTCCGGGTTTAGAATTTTGTGGAACACTGTAAAATCCTTCCTTGACCCTAAGACTACAGCGAAAATCCATGTTCTTGGTAACAAGTATGATACTAAATTGCTTGAAATAATCGATGCAAATCAATTGCCTGAGTTTTTAGGAGGCAGTTGTACCTGTCCTGGAGTTGAAGGAGGTTGTATGCGTTCTGATAAGGGTCCATGGAAGGATCCAGAAATAATGAAGATGGTTCAAAATGGTGATCACAAATGTTCGAAAGGGAAAGGGTCTCAAGCTGAGGAGGAGAAACATGTGGAGGAATCCAAGCCTATGTCCAGGTTGGGAAGTCTCAGCAAACAAGCCTCTTCACTTAGTGATAAGGGAAACAAGAGTTTCAAGGGGGAAGCGGCTCTCACCAAACAAGTTTCTTCACTTAGTGATAAGGCCGCAGCGAATAAAAAGGTCCAAGAGAGCCAGGCTGCTCAAACAAAAACGACACAGCAGGCTCTTGTGGTTGCGGTTAAAACCAAGAAGCATGAGGACATTATCCCCGTGATTGACAAAACGGTGACAAAAAAGATTGACAAAGTTGACAAAACTACAGCATCTAAAGTGGAAAAGGTTTATAGTACTAGATGTGTCAATGCCAAAATGAAAAAAAATGTGAAAGAAAGAAAGAATGCACTTCCGAATAGTAATTACGCGTTCAACTGGTATCTAGATGAAGGAGGAGAATGCGCCCCTGGTGCCATGGATGTTGATATGAGCAAGATTCACGGAAAAGAAAATTCCAAGGTTTTGAATGGCCTGATGGCCTTTGTAATGGGAATCTTCACCATGGCCAGGGTGACACAAAACATGCCAAAGCAACTCACTGCCTCTGCTTCTTGTTCTTCTAAGACTACTACTACTACTCATGCCAACAACACCATCATTTCTTCATCACAAAAAATCCAATCTTCTACTACTCATGAATTTATTGGGAAAACCCATATCCCTCATTCTTCTTCTCCTTCTCATAATGATAATGATCATGATCATCATGATCGTGATGTATGTAATGTTGGGGTGGTCCCGTCTCTTGATGAGAAGGTCCCCTCTGACGATTTGCCTGATCCCCCAACTGCCCTCTCTACTGCAGAGTTCACTACTGTGATGAAGCGGATGGCTGAGTTGGAAGAGAGAATGCACAACATGAACCAAAAGTCTGCTGCCTTGCCCCCTGAGAAGGAGCAGTTGCTCAACTCCGCTATCTCCCGCGCCGACAACCTTGAGAAACAACTCATGGAAACCAAGAAGCAATTGGAGGATTCACTCAGCAAGCAAGAGGAGCTCTCTGCTTACATTGAGAAGAAGAAGAGAAAGAAGAAGAAGATGAAAAGGGAAGAGGATAACGTACCTAGAGGAAAGAAAGAGGGAGTTCCGGCAACAGAGAGAATAGCAGCAGCGGTAATGACAGAAGCGACAAAAACAGCAGTGACAAAGCGACCAACGCGGCGCAAGAAGTCTATGAAGTCTTTGGAGTCTGTTGGTGGCGCCGGCGTGGTAGAGGAGGATGACAAAGGTGGTTTGGGGGAGAGAGATGCAGAGAGAAAGAGTGGATCTTTTAAAATGATATGA 2277 0.4401 MRKKAMNASNGLRNSLTKKGRRSSKVMSIEIEDVHDEEEMKHVDEFRQALILDELLPAKHDDYHMMLRFLKARKFDIEKTKLMWSNMLKWRKEFGSDTIVEEFEFKEINEVIKYYPHGHHGVDKDGRPVYIERLGQVDATKLMQVTTMDRYIKYHVQEFEKTFDIKFPACSIAARKQIDQSTTILDVQGVGLKNFNKNARELVTRLQQIDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKIHVLGNKYDTKLLEIIDANQLPEFLGGSCTCPGVEGGCMRSDKGPWKDPEIMKMVQNGDHKCSKGKGSQAEEEKHVEESKPMSRLGSLSKQASSLSDKGNKSFKGEAALTKQVSSLSDKAAANKKVQESQAAQTKTTQQALVVAVKTKKHEDIIPVIDKTVTKKIDKVDKTTASKVEKVYSTRCVNAKMKKNVKERKNALPNSNYAFNWYLDEGGECAPGAMDVDMSKIHGKENSKVLNGLMAFVMGIFTMARVTQNMPKQLTASASCSSKTTTTTHANNTIISSSQKIQSSTTHEFIGKTHIPHSSSPSHNDNDHDHHDRDVCNVGVVPSLDEKVPSDDLPDPPTALSTAEFTTVMKRMAELEERMHNMNQKSAALPPEKEQLLNSAISRADNLEKQLMETKKQLEDSLSKQEELSAYIEKKKRKKKKMKREEDNVPRGKKEGVPATERIAAAVMTEATKTAVTKRPTRRKKSMKSLESVGGAGVVEEDDKGGLGERDAERKSGSFKMI 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01071 758 Pfam CRAL/TRIO domain 114 275 IPR001251 -
Arst5g01071 758 MobiDBLite consensus disorder prediction 679 694 - -
Arst5g01071 758 CDD SEC14 105 275 IPR001251 -
Arst5g01071 758 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 1 672 - -
Arst5g01071 758 Pfam CRAL/TRIO, N-terminal domain 35 86 IPR011074 -
Arst5g01071 758 FunFam SEC14 cytosolic factor 95 308 - -
Arst5g01071 758 MobiDBLite consensus disorder prediction 332 348 - -
Arst5g01071 758 Coils Coil 601 621 - -
Arst5g01071 758 MobiDBLite consensus disorder prediction 1 24 - -
Arst5g01071 758 SUPERFAMILY CRAL/TRIO domain 107 304 IPR036865 -
Arst5g01071 758 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 107 281 IPR001251 -
Arst5g01071 758 MobiDBLite consensus disorder prediction 531 556 - -
Arst5g01071 758 Gene3D - 7 94 - -
Arst5g01071 758 SMART CRAL_TRIO_N_2 62 87 IPR011074 -
Arst5g01071 758 MobiDBLite consensus disorder prediction 306 349 - -
Arst5g01071 758 MobiDBLite consensus disorder prediction 306 329 - -
Arst5g01071 758 MobiDBLite consensus disorder prediction 531 571 - -
Arst5g01071 758 SUPERFAMILY CRAL/TRIO N-terminal domain 36 102 IPR036273 -
Arst5g01071 758 Gene3D - 95 308 IPR036865 -
Arst5g01071 758 SMART sec14_4 107 278 IPR001251 -
Arst5g01071 758 MobiDBLite consensus disorder prediction 669 758 - -
Arst5g01071 758 PRINTS Cellular retinaldehyde-binding protein signature 267 276 - -
Arst5g01071 758 PRINTS Cellular retinaldehyde-binding protein signature 65 87 - -
Arst5g01071 758 PRINTS Cellular retinaldehyde-binding protein signature 234 253 - -
Arst5g01071 758 MobiDBLite consensus disorder prediction 738 758 - -
Arst5g01071 758 MobiDBLite consensus disorder prediction 557 571 - -
Arst5g01071 758 Coils Coil 633 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01071 Arst-Chr5 10633287 10638413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01071 43 272 Acyl Lipid Metabolism Gene Families AT5G47730 28.279 3.08e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01071 K26544 - rvl:131336141 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01071 5 10633287 10638413 Arst5g01071 5 10633287 10638413 ECH