Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01069 ATGTTTTCCCAAAGAGAGATGCCATCAGCGTCATCAATGTTCTCCGCATATGCATCGATGGCAGCATCCATGATGCTGCTGCGATCAATGGCGAACGAGCTCATTCCGCAGCCAATTAGAGGCTACATCCTGAATGCCTTCCACTACTTAGTGAAGCCGAGATCCCAGTCGCTGACCCTGGTGATCGAGGAATCCAACGGCATAGCACGCAACCACGTGTACGATGCAGCCGAGGCCTACTTGTCCACCAGAGTGAGCCCCGACAACGAGAGGCTCAAAATCTGCAAGAGCCCCAAGGAGAAGAAGCTCACCATCCGCCTCGAAAAGGGGGAGAAGCTGCTGGATCTGTACGACGGCGTGTCCCTCCGCTGGAGGTTCATCTGCGCCGAGTCCGACAAGAATGCCCCCAGCGAGAACACCAGTATTAGTAGCAACGTATCGGTGAGGTCGGAGAAGCGCTACTTCGAGCTGAGTTTCCACAAGAAGCACAAGCAAATGGTGTTGGAGTCTTATCTGCCTTTCGTTCTCGAGAAGGCGAAGGAGATGAAGGACGACGAGAGGGTTCTGAAGATGCATACTCTCAACACTTCTTACTGTTACGGTGGTGTGAAGTGGGATTCCATCAATCTGGAGCACCCTTCCACTTTCGAGACGCTGGCTATGGACTCGGAGCAGAAGGAAGCCATCATGGAGGACCTCAACAGGTTCGTGAAGAGGAGGGAGTTTTACAAGAGAGTCGGGAGGGCGTGGAAGCGTGGCTACTTGCTCTATGGACCTCCGGGGACTGGAAAATCAAGCTTGATTGCTGCCATGGCTAATTACCTCAAGTTTGATATCTATGACTTGCAGCTTGCTAACATAGTCAGGGATTCCGATCTCAGAAAGCTGCTGCTGGCAACTGCCAATAGGTCCATTCTTGTAATCGAAGACATTGATTGCAGCGTCGATCTTCCCGAGCGTCGCCATGTCGATCATCACCATCATCATGGACGTAAACAAACCGATGTACAGTTAACATTGTCCGGATTGCTGAACTTCATAGATGGGCTATGGTCAAGCTGCGGGGACGAGAGAATCATCATATTCACGACGAACCACAAGGAAAGGCTAGACCCTGCTCTTCTCAGACCCGGAAGAATGGACATGCACATTCACATGTCCTACTGCTCCTTCCAAGCCTTCAAGATCCTTGCCTCCAACTACCTGGACATCTCGTCCGACCACCACCACCTCTTTCCGGAGATCGAAGGGCTGATCGAGGACACTCAGATCACCCCTGCTCATGTGGCAGAGGAGCTGATGAAGAGCGAAGACGCCGACGTGGCCCTCCAAGGATTCGTGAAGCTCCTCAAGCGGAAGAAGATGGAAGGTGATGTTTGCGAGAACGATGATCCGGATAACAAAGCTGAACCGGCTACTAAGCAATCTAAGAAGCGCAAGGTTGCTTGCAAGCAAAAGAAAACTGTAGCTGCTGCTGGTACACAGAGAAGGACAAGAAGGCTTAGAAGAGGCTCTAGTTTGTAA 1524 0.5157 MFSQREMPSASSMFSAYASMAASMMLLRSMANELIPQPIRGYILNAFHYLVKPRSQSLTLVIEESNGIARNHVYDAAEAYLSTRVSPDNERLKICKSPKEKKLTIRLEKGEKLLDLYDGVSLRWRFICAESDKNAPSENTSISSNVSVRSEKRYFELSFHKKHKQMVLESYLPFVLEKAKEMKDDERVLKMHTLNTSYCYGGVKWDSINLEHPSTFETLAMDSEQKEAIMEDLNRFVKRREFYKRVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLANIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERRHVDHHHHHGRKQTDVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSFQAFKILASNYLDISSDHHHLFPEIEGLIEDTQITPAHVAEELMKSEDADVALQGFVKLLKRKKMEGDVCENDDPDNKAEPATKQSKKRKVACKQKKTVAAAGTQRRTRRLRRGSSL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01069 507 Gene3D - 204 384 IPR027417 -
Arst5g01069 507 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
Arst5g01069 507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 439 IPR027417 -
Arst5g01069 507 MobiDBLite consensus disorder prediction 457 477 - -
Arst5g01069 507 CDD RecA-like_BCS1 229 386 - -
Arst5g01069 507 SMART AAA_5 250 390 IPR003593 GO:0016887
Arst5g01069 507 Gene3D - 385 457 - -
Arst5g01069 507 Pfam ATPase family associated with various cellular activities (AAA) 255 387 IPR003959 GO:0005524|GO:0016887
Arst5g01069 507 MobiDBLite consensus disorder prediction 457 507 - -
Arst5g01069 507 ProSitePatterns AAA-protein family signature. 358 376 IPR003960 GO:0005524|GO:0016887
Arst5g01069 507 PANTHER BCS1 AAA-TYPE ATPASE 15 455 - -
Arst5g01069 507 FunFam AAA-ATPase ASD, mitochondrial 206 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01069 Arst-Chr5 10497770 10501890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01069 215 381 Miscellaneous Gene Families AT3G47060 33.702 2.03e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01069 - - gmx:100789621 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01069 5 10497770 10501890 Arst5g01069 5 10497770 10501890 ECH