Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01054 ATGTTGAAGCATTTAGTGTTAGTTATTCTTTTGGCCGTTTTGGTTCATGACCATGTTCATGATGGCACTACTACCGTGGAAGCTGCAGGGGATGGTTTTGTAAGAACAAGAGGCATCCACTTTGTGCTGAATGGGAACCCTTTTTATGCAAATGGCTTCAATGCTTATTGGCTTATGTATGCAGCTTCAGATCCATCTCAGAGGTACAAGGTCTCTTCAGCATTCCATGAAGCAACAAGCCATGGCCTCACAGTTGCTAGAACTTGGGCTTTCAGCGACGGTGGTTATAGACCCTTACAATATGCTCCCGGATTCTACAATGAACAAATGTTTAAGGGGTTAGATTTTGTTATATATGAGGCTAGGAAGTATGGTATAAAGCTGATACTGAGTTTGGTGAATAACTATGAGAGCTTTGGAGGGAAGAAGCAGTATGTGAACTGGGCTAGAAGTAAAGGGCAGTACCTTACATCAGACGATGATTTCTTCAGGAGCCCTCTTGTTAAGGGTTACTATGCTAACCATGTCAAGACTGTTCTTAACAGATACAACAGTTTTACCGGTATTCACTACAAGGATGATCCAACAATCATGGCCTGGGAACTCATGAATGAACCCAGGTGCACTTCAGATCCTTCAGGCAGGACTATTCAGGCTTGGATCACGGAAATGGCTTCCTTAGTGAAGTCCATAGACAGGAACCACTTATTGGAGGCTGGTCTTGAAGGCTTCTATGGTCAATCAACACCCCAAAGGAAGAGAATGAACCCTGCTGGCTTCAATATTGGCACAGATTTCATTGCAAATAACCGCATCCCTGGCATTGACTTTGCAACCGTTCACTGTTACCCCGACCAATGGGTATCCAATTCGAATGAGCAGTATCAACTCTCATTCTTGAACAACTGGCTCAATGCTCACTTCATAGACGCGCAGTATGCTCTGAGGAAGCCAATACTTGTGGCAGAATTTGGAAAATCGTTCAAGGACTCGGGTTACAACACCTACCAAAGGGACCAGCTCTTCAGTACCGTGTTCTACAAGATATTGGCTTCTGCCAAGAGAGGAGGACCGGCAGCAGGAGCACTCTTCTGGCAGCTTCTCACGGAAGGAATGGAGTCATTCCAAGATGGTTATGGCATAATGCTGGGGCAGGGTTCTTCTACTGCAAACATGATTGCTCAGCAGAATCACAGGCTGTACCTTATTCGCAGGATTCTTGGGAGGTTTGCGAATATACGGCGGTGGAAGAGGGCCAGGGGAAACAGAAGGTCTGGTGGAAATGGGGGTGGAAGTTCAAGAATGGAATTGCCTCAGTTATTGAATTAG 1329 0.4537 MLKHLVLVILLAVLVHDHVHDGTTTVEAAGDGFVRTRGIHFVLNGNPFYANGFNAYWLMYAASDPSQRYKVSSAFHEATSHGLTVARTWAFSDGGYRPLQYAPGFYNEQMFKGLDFVIYEARKYGIKLILSLVNNYESFGGKKQYVNWARSKGQYLTSDDDFFRSPLVKGYYANHVKTVLNRYNSFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASLVKSIDRNHLLEAGLEGFYGQSTPQRKRMNPAGFNIGTDFIANNRIPGIDFATVHCYPDQWVSNSNEQYQLSFLNNWLNAHFIDAQYALRKPILVAEFGKSFKDSGYNTYQRDQLFSTVFYKILASAKRGGPAAGALFWQLLTEGMESFQDGYGIMLGQGSSTANMIAQQNHRLYLIRRILGRFANIRRWKRARGNRRSGGNGGGSSRMELPQLLN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01054 442 FunFam Mannan endo-1,4-beta-mannosidase 6 30 404 - -
Arst5g01054 442 PANTHER - 4 425 IPR045053 GO:0004553
Arst5g01054 442 MobiDBLite consensus disorder prediction 421 442 - -
Arst5g01054 442 Pfam Cellulase (glycosyl hydrolase family 5) 45 341 IPR001547 GO:0004553|GO:0071704
Arst5g01054 442 Gene3D Glycosidases 29 404 - -
Arst5g01054 442 SUPERFAMILY (Trans)glycosidases 33 390 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01054 Arst-Chr5 10348244 10350382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01054 2 429 Glycoside Hydrolase AT5G66460 65.888 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01054 K19355 - gmx:100792073 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01054 5 10348244 10350382 Arst5g01054 5 10348244 10350382 ECH