Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01015 ATGGCAGCTGCTAGGTTAACCACTTGCGCCGCGGTGGCAGCCGCGGTGGCTTCCATGTCCTCGCTTTCCGATCGCGCCGCCCACGCCGATTCTTCTTTTCGCTTCCCGTTCTTCTCTTCTTCACCTTCCAATTCCCCTTCGCCGTCCGACCCTGCTTCCGATTCTAAGATGGAGCAGCCTCCCCCCGATGAACCTAACAAGTCCGGCTTCGACCCGGAATCGTTGGAAAGAGGAGCCAAAGCCCTCCGTGAAATCAATAGTTCTCCCTACTCTAAACAGGTGTTTGACTTAATGCGAAAGCAGGAACAAACTCGCCTTGCTGAGTTAGATGCTGAGAAAGTTTATTTTGAACTTATTCAATCCCAAGGAGATATTGAAAGGCAGCAGAAAATGGCTGAAGAACAGCGAAATCTAATGCAAGAGCAAGCTCAGAAACAGGCCCAGGTGCTGCGATATGAAGATGAATTGGCAAGGAAAAGAATGCAGACAGATCATGAAGCTCAAAGGCGACACAATGTTGAATTGGTTAAGATGCAAGAGGATTCTTCTGTAAGAAAGGAGCAGGCAAGACGTGCTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGAGAGAGAGCGTGCTGAGATAGAAAGAGAAACTATTAGAGTTAAAGCAATGGCAGAGGCTGAAGGTCGAGCGCATGAAGCAAAATTGACTGAGGATCATAAAAGGAGAATGCTTATGGAACGGATGCAGGGTGAAAGAGATAAATGGCTTGCTGCGATCAACACAACCTTTGGTCATATTGAAGGTGGTTTAAGGGCCTTATTGACTGATAGGGACAAATTGGTTATGACTGTTGGGGGAGCTACTGCATTAGCTGCAGGAGTATATACAACTAGAGAAGGTGCTAAAGTTACATGGGGCTATATAAATCGGATTTTGGGGCAGCCATCATTGATCCGGGAATCATCCATGGCAAAGTTTCCAGGCTCAAGAATCATATCTCAAGCCAAAAATAGAGTTTTCAATTATAGTACTATGGCCAGGGCAGAAAAGCCTGTTGAGAGTCAAAATGGTGGTCTTGGAAATGTAATCCTCCATCCATCATTGCAGAAAAGAATAGAGCATCTTGCACGGGCAACATCAAATACCAAGGCTCATCAGGCACCATTCCGCAACATGCTTTTCTACGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGGAAATCGGGTTTGGATTATGCTATGATGACTGGAGGAGATGTTGCACCTTTGGGCCCACAGGCTGTTACCAAAATTCATGAGATATTTGATTGGGCCAAGAAATCAAGAAAAGGTTTATTGCTTTTCATTGACGAGGCCGATGCTTTCCTGTGCGAGCGTAACAGCACCCACATGAGTGAAGCTCAACGAAGTGCACTAAACGCATTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATTGTACTTGTCCTTGCCACCAACAGACCCGGTGATCTTGATAGTGCAGTCACTGATCGCATCGACGAAGTGATTGAATTCCCCCTCCCTGGAGAGGAGGAACGTCTAAAATTATTGAAGCTCTATTTGAACAAATATATATGTACTGACAATAATGGCTCCAAGAAAGGCGTGTTGCTAAAGCAGACCCAGAAGATTACGGTAAAAGATTTATCCGAGGATGTGCTAAGAGAGGCTGCCAAGAAAACAGAGGGATTTTCTGGGCGCGAGATAGCCAAACTTGTGGCCGGTGTCCAAGCTGCTGTTTATGGGCGCCCAGACTGCACCTTGGATTCTCAGTTGTTCAAAGAAATCGTAGATTATAAAGTGGTGGAACAATTCATTAAAATATTTGTTACCTAG 1866 0.4577 MAAARLTTCAAVAAAVASMSSLSDRAAHADSSFRFPFFSSSPSNSPSPSDPASDSKMEQPPPDEPNKSGFDPESLERGAKALREINSSPYSKQVFDLMRKQEQTRLAELDAEKVYFELIQSQGDIERQQKMAEEQRNLMQEQAQKQAQVLRYEDELARKRMQTDHEAQRRHNVELVKMQEDSSVRKEQARRATEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEDHKRRMLMERMQGERDKWLAAINTTFGHIEGGLRALLTDRDKLVMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIISQAKNRVFNYSTMARAEKPVESQNGGLGNVILHPSLQKRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNKYICTDNNGSKKGVLLKQTQKITVKDLSEDVLREAAKKTEGFSGREIAKLVAGVQAAVYGRPDCTLDSQLFKEIVDYKVVEQFIKIFVT 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01015 621 Gene3D - 333 535 IPR027417 -
Arst5g01015 621 Coils Coil 125 155 - -
Arst5g01015 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 617 IPR027417 -
Arst5g01015 621 MobiDBLite consensus disorder prediction 162 210 - -
Arst5g01015 621 MobiDBLite consensus disorder prediction 162 193 - -
Arst5g01015 621 SMART AAA_5 386 519 IPR003593 GO:0016887
Arst5g01015 621 ProSitePatterns AAA-protein family signature. 489 508 IPR003960 GO:0005524|GO:0016887
Arst5g01015 621 PANTHER PUTATIVE ATP-ASE 19 613 - -
Arst5g01015 621 MobiDBLite consensus disorder prediction 34 77 - -
Arst5g01015 621 Pfam ATPase family associated with various cellular activities (AAA) 390 517 IPR003959 GO:0005524|GO:0016887
Arst5g01015 621 Coils Coil 183 217 - -
Arst5g01015 621 Pfam ATPase family AAA domain-containing protein 3, N-terminal 58 317 IPR021911 -
Arst5g01015 621 FunFam ATPase family AAA domain-containing protein 3 344 534 - -
Arst5g01015 621 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01015 Arst-Chr5 9942056 9946120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01015 366 592 Miscellaneous Gene Families AT5G53170 30.085 4.44e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01015 K17681 - gmx:100777755 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01015 5 9942056 9946120 Arst5g01015 5 9942056 9946120 ECH