Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00987 ATGAAGTGTCCATTCTGCTCGGCGGCGCAGGGGCGGTGCGCCACCACGAGCTCCGGTCGGTCGATCACGGAGTGCACGTCATGCGGGCGCGTGGTGGAGGAGCGGCACTCCCACCCACACCACCTGTTCCACGTGCGGGCCCAGGATAACCCTCTATGCCTCGTGACCTCTGATCTCCCCAACCCCGAACCCTCTCCAATCACCAAGGACGACGACCCTTTCGAGCCCACGGGATTCATAACCGCCTTCTCCACCTGGTCCCTTGAACCCATCCCCCTCTACCTCCAGTCCTCTCTCTCATTCTCCGGCCACCTCGCCGAGCTCGAGCGCACTCTCGAATCCACCTCCTCCTCATCGTCGTCGTCTTCTTCTTCTTCTTCGACGGTTGTGGTGGATAATTTAAGGGCGTACATGCAGATTATCGATGTGGCCTCCATACTTGGCTTAGACTGCGATATTTCCGACCACGCGTTTCAGCTGTTCAGGGATTGTTGCTCGGCTACTTGCCTCAGAAACCGTAGCGTTGAGGCTCTTGCTACTGCCGCTCTTGTTCAAGCTATTCGAGAGGCCCAAGAGCCTCGAACCCTTCAGGAAATTTCAATAGCAGCTAATGTACCACAAAAGGAAATTGGGAAGTATATGAAGATTCTGGGAGAAGCTTTACAGCTAAGTCAACCTATTAACAGCAATTCCATATCAGTCCATATGCCAAGATTTTGCACGCTCCTACAGCTCAACAAATCTGCTCAGGAACTGGCTACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACTCGTAGGAATCCAATTAGCATTTCAGCTGCTGCTATATATTTGGCTTGCCAACTCGAAGACAAACGTAAAACTCAGGCTGAAATTTGCAAGGTAACTGGCCTTACTGAAGTCACTCTACGTAAAGTGTACAAGGAACTACTGGAGAATTGGGATGATTTGCTTCCATCAAATTACACCCCGGCTGTGCCTCCAGAGAGAGCATTTCCCATGACCGTAATTGCTTCTGGTCGCTCCACAACAGCTAAGGTTGATGCAATAGAGACCACTTTGGACACAGAGAAGTTGCCAGAAATCAAACCTAACAAACCGACTGAGGTCTCAGTCACTGTGCCACAGTCCAGAGGGAAGGATGAGGCCGAAGTTAAAAGCAATACCTGTGCCGCCAACCATCCCACACAGAATCAACAGTCAACTTATTGGCAATCCCAGCTTCCCAGTGGGACAAACAGTCATCCTAATGTTTTGCAAGGAATGGATATCGACAGATCAGAGAGTAACCACCCCCACACTGAAAAGATGGCAGAGGACACAAATGGCACTGCCAGTGCCAATTCTCTAAACCCAAGCCAACTTTACAGTCCTCCTGGTTCAAGTGCAAGCTCTGTTATGAGACAGTTTTCAGCTTCCCCTTCATCTGGACACGTGAGTGTTCGATTAGCGCAGTCACCTAAGACGATGCCAGGTTATCCGGAGAACTGA 1500 0.5067 MKCPFCSAAQGRCATTSSGRSITECTSCGRVVEERHSHPHHLFHVRAQDNPLCLVTSDLPNPEPSPITKDDDPFEPTGFITAFSTWSLEPIPLYLQSSLSFSGHLAELERTLESTSSSSSSSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYMKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPMTVIASGRSTTAKVDAIETTLDTEKLPEIKPNKPTEVSVTVPQSRGKDEAEVKSNTCAANHPTQNQQSTYWQSQLPSGTNSHPNVLQGMDIDRSESNHPHTEKMAEDTNGTASANSLNPSQLYSPPGSSASSVMRQFSASPSSGHVSVRLAQSPKTMPGYPEN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00987 499 Gene3D - 234 330 - -
Arst5g00987 499 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 369 IPR000812 GO:0006352|GO:0070897
Arst5g00987 499 SUPERFAMILY Cyclin-like 232 330 IPR036915 -
Arst5g00987 499 Gene3D - 134 225 - -
Arst5g00987 499 Pfam Transcription factor TFIIB repeat 136 217 IPR013150 GO:0017025
Arst5g00987 499 Pfam Transcription factor TFIIB repeat 234 315 IPR013150 GO:0017025
Arst5g00987 499 CDD CYCLIN_TFIIB_archaea_like_rpt2 231 317 - -
Arst5g00987 499 FunFam Transcription initiation factor IIB 234 331 - -
Arst5g00987 499 SUPERFAMILY Cyclin-like 135 225 IPR036915 -
Arst5g00987 499 FunFam Transcription initiation factor TFIIB 134 225 - -
Arst5g00987 499 MobiDBLite consensus disorder prediction 442 486 - -
Arst5g00987 499 MobiDBLite consensus disorder prediction 359 499 - -
Arst5g00987 499 SMART cyclin_7 138 219 IPR013763 -
Arst5g00987 499 SMART cyclin_7 234 315 IPR013763 -
Arst5g00987 499 MobiDBLite consensus disorder prediction 392 427 - -
Arst5g00987 499 PRINTS Transcription initiation factor IIB signature 235 253 IPR000812 GO:0006352|GO:0070897
Arst5g00987 499 PRINTS Transcription initiation factor IIB signature 180 199 IPR000812 GO:0006352|GO:0070897
Arst5g00987 499 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Arst5g00987 499 PRINTS Transcription initiation factor IIB signature 206 221 IPR000812 GO:0006352|GO:0070897
Arst5g00987 499 PRINTS Transcription initiation factor IIB signature 269 285 IPR000812 GO:0006352|GO:0070897
Arst5g00987 499 PRINTS Transcription initiation factor IIB signature 301 315 IPR000812 GO:0006352|GO:0070897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00987 K03124 - gmx:102662353 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00987 5 9539714 9542662 Arst5g00987 5 9539714 9542662 ECH