Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00956 ATGACTTCTCTGAATCTTGTTTCACGGACTTGTCCCATTCCCTTTCTCAGCCATGCAACCACCGCTATGTTCCCAACCCCCAATTCCGTCATCTTCTCTACCAAACCATTCTCTTATGCCTTCTCCGTCTCGGCAATTGTCACCGCCAACCAAGAAACCATCGTCCTCGACAAACCCGCCACCACCACCACCTTCGACTTCACAGCCTATATGCTTCGGAAGGCTGATACAGTTAACAAAGCCTTGGACGCAGCCATAGCGATGAAGGAACCTGAGAAGATCTACGAGGCGATGCGTTACTCTCTCCTCGCCGGAGGCAAGAGGGTTCGCCCGCTTCTCTGCATCGCCGCCTGCGAGCTAGTCGGCGGAGACGAGGAAACCGCACTCGCCGCCGCATGCGCCGTGGAGATGATTCACACCATGTCGCTCATCCACGACGACCTCCCATGCATGGACAACGACGACCTCCGCCGTGGAAAGCCCACAAACCACAAAGCTTTTGGCGAAGACGTTGCCATTCTCGCGGGCGACGCCCTCCTGGCATTCGCCTTCGAACACATCGCTGTGTCCACCAAAGGGGTGTCGCCAACGAGGGTGGTCCGCGCCATCGCGGAGTTAGCAAAATCGGTGGGGTCAGAAGGGTTAGTGGCGGGTCAAATAGTGGACACACATTCCGAAGGGTTATCGAATGTGGGGTTGGAGAGGCTGGAGTACATTCACCTGCACAAAACGGCGGCGTTGCTTGAAGCTGCGGTCGTGCTGGGAGGCATAATGGGTGGCGGAAACGATGATGAAGTTGAGAACTTGAGGCTGTTTGCAAGGAGCATTGGGTTGCTGTTTCAGGTTGTGGACGACATTCTCGATGTTACAAAGTCATCGGAGCAACTTGGGAAGACGGCGGGGAAGGACTTGGTGGCTGATAAAGTCACTTATCCGAAGCTCTTGGGGATTGAAAAGTCAAAGGAATTTGCTCATAAGTTGAACAAAGATGCATTGCAATACCTTGCTGAATTCGATGAGGATAAGGCTGCTCCCTTGGTTGCTCTTGCTAATTTCATTGCTAACAGGCAAAGTTAA 1077 0.533 MTSLNLVSRTCPIPFLSHATTAMFPTPNSVIFSTKPFSYAFSVSAIVTANQETIVLDKPATTTTFDFTAYMLRKADTVNKALDAAIAMKEPEKIYEAMRYSLLAGGKRVRPLLCIAACELVGGDEETALAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEDVAILAGDALLAFAFEHIAVSTKGVSPTRVVRAIAELAKSVGSEGLVAGQIVDTHSEGLSNVGLERLEYIHLHKTAALLEAAVVLGGIMGGGNDDEVENLRLFARSIGLLFQVVDDILDVTKSSEQLGKTAGKDLVADKVTYPKLLGIEKSKEFAHKLNKDALQYLAEFDEDKAAPLVALANFIANRQS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00956 358 CDD Trans_IPPS_HT 90 356 IPR000092 GO:0008299
Arst5g00956 358 SUPERFAMILY Terpenoid synthases 68 341 IPR008949 -
Arst5g00956 358 ProSitePatterns Polyprenyl synthases signature 2. 276 288 IPR033749 -
Arst5g00956 358 Gene3D Farnesyl Diphosphate Synthase 60 358 IPR008949 -
Arst5g00956 358 ProSitePatterns Polyprenyl synthases signature 1. 143 159 IPR033749 -
Arst5g00956 358 FunFam Geranylgeranyl diphosphate synthase 64 358 - -
Arst5g00956 358 SFLD Polyprenyl Transferase Like 69 356 - -
Arst5g00956 358 SFLD Polyprenyl Transferase Like 69 356 - -
Arst5g00956 358 Pfam Polyprenyl synthetase 92 327 IPR000092 GO:0008299
Arst5g00956 358 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 47 357 - -
Arst5g00956 358 SFLD Isoprenoid Synthase Type I 69 356 - -
Arst5g00956 358 SFLD Isoprenoid Synthase Type I 69 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00956 Arst-Chr5 9137447 9138842 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00956 K13789 - zju:107424859 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00956 5 9137447 9138842 Arst5g00956 5 9137447 9138842 ECH