Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00907 ATGTATAATATACACTTGTTGGTTGGTAGCTTAAGGTCAAGGTGCAGAAAAAGAGTCTTCTTGCTGGAGCCACCTCTGCTCCGTGGCCGTATTGCCTTCCGAGCTGCTGAAGACGAAGAGATGGACGGTTACAACTCCGACGGGAACACTAGGAAACCCCTTATCACCATTGACGCCCCACATTTATTAGAAACTGCTCAAATGGCCGTTGACAATGACTCCTTACTCTCTCCTCTTGCCAAGTCTCCATGGTCCTCTCACATGAACCACAACACCAACATTGGAGGAGATGGCTTCACCAACCCCAACGATGAAGCTCTCGTTGGCTCCCTCGTCCGCGAAGAAGGCCACATATACTCCCTCGCTGCCACCAGGGACCTTCTCTACACCGGCTCCGACAGCAAGAACATTAGGGTTTGGAAGAACCAGAAGGAGTTTGCAGGCTTCAAATCCAACAGCGGCTTGGTCAAATCCATCGTCATCGCCGGTGAAAAGATTATCACCGGCCACCAAGACGGCAGGATTAGGGTTTGGAAGGTGTCTTCGAGAAACGAACAAATACACAGACGCATTGCCACTCTTCCCACGCTCAGAAACTACATCAAGTGCTCCATGAGACCCAGCAACTACATCGAGGTTCGAAAGAACCGCAATGTGCTTTGGATCAAGCACTACGACGCCATCTCCTGCCTTAGTGTCACGGAGGACTATGCCTTCATATACTCAGCTTCTTGGGACAAGACCTTCAAGGTTTGGCGAGCCTCCAACTTCAAGTGCTTGGAGTCTGTGGTGGCGCATGACGACGCCGTTAACTCCTTGGTTGTGGCGCCGGAAGGCTTGGTGTTCTCGGGGTCCGCGGATGGCACTGTCAAAATCTGGCGGCGCGAGATGCAAGCGAAAGGAACGAAACACTTCTTCCAGCAGACATTGCTGAAGCAAGAGTGTGCGGTGACGGCGCTGGTGATAAACGCCGACGGGAATGTTCTGTACGGCGGTTCGTCGGACGGGTTGGTGAACTTCTGGGTAAGGGGGACAAAGTACGAACACATGGGGATACTTCGGGGGCATAAACTGGCGGTGCTGTGTTTGGCGACGGCGGGGAACTTGATATTGAGTGGGTCGGCGGATATGGGGATCTGCGTCTGGAAGAGGACGCTTAGCAACGAGCATGTTTGCCTGACGACGTTGACCGGTCACACTGGACCGGTGAAGTGTCTGGCGGTGGAGAAGGACCCGGAGGCCATGTTGAATGACAAGAAGTGGATTGTGTATAGCGGCAGCTTGGACAAATCCGTCAAGGTTTGGAGAGTTTGCGAGAACGCGCCGCCCTCCCAACACGGCCACCAGCAATCTCGTACTAGTTCCGAGTTCCCCAGAGTCTCTTCTTTGAGGAAAATGGGTTCCAGAAGATACTAA 1416 0.5297 MYNIHLLVGSLRSRCRKRVFLLEPPLLRGRIAFRAAEDEEMDGYNSDGNTRKPLITIDAPHLLETAQMAVDNDSLLSPLAKSPWSSHMNHNTNIGGDGFTNPNDEALVGSLVREEGHIYSLAATRDLLYTGSDSKNIRVWKNQKEFAGFKSNSGLVKSIVIAGEKIITGHQDGRIRVWKVSSRNEQIHRRIATLPTLRNYIKCSMRPSNYIEVRKNRNVLWIKHYDAISCLSVTEDYAFIYSASWDKTFKVWRASNFKCLESVVAHDDAVNSLVVAPEGLVFSGSADGTVKIWRREMQAKGTKHFFQQTLLKQECAVTALVINADGNVLYGGSSDGLVNFWVRGTKYEHMGILRGHKLAVLCLATAGNLILSGSADMGICVWKRTLSNEHVCLTTLTGHTGPVKCLAVEKDPEAMLNDKKWIVYSGSLDKSVKVWRVCENAPPSQHGHQQSRTSSEFPRVSSLRKMGSRRY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00907 471 FunFam BnaA09g28200D protein 211 298 - -
Arst5g00907 471 MobiDBLite consensus disorder prediction 441 471 - -
Arst5g00907 471 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 72 441 IPR045182 -
Arst5g00907 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 221 262 IPR001680 GO:0005515
Arst5g00907 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 149 188 IPR001680 GO:0005515
Arst5g00907 471 MobiDBLite consensus disorder prediction 443 461 - -
Arst5g00907 471 Gene3D - 95 219 IPR015943 GO:0005515
Arst5g00907 471 SMART WD40_4 104 141 IPR001680 GO:0005515
Arst5g00907 471 SMART WD40_4 142 179 IPR001680 GO:0005515
Arst5g00907 471 SMART WD40_4 303 342 IPR001680 GO:0005515
Arst5g00907 471 SMART WD40_4 215 253 IPR001680 GO:0005515
Arst5g00907 471 SMART WD40_4 389 436 IPR001680 GO:0005515
Arst5g00907 471 SMART WD40_4 256 294 IPR001680 GO:0005515
Arst5g00907 471 SMART WD40_4 346 383 IPR001680 GO:0005515
Arst5g00907 471 CDD WD40 115 436 - -
Arst5g00907 471 Gene3D - 301 465 IPR015943 GO:0005515
Arst5g00907 471 SUPERFAMILY WD40 repeat-like 108 445 IPR036322 GO:0005515
Arst5g00907 471 Pfam WD domain, G-beta repeat 392 435 IPR001680 GO:0005515
Arst5g00907 471 Pfam WD domain, G-beta repeat 349 383 IPR001680 GO:0005515
Arst5g00907 471 Pfam WD domain, G-beta repeat 258 293 IPR001680 GO:0005515
Arst5g00907 471 Pfam WD domain, G-beta repeat 224 252 IPR001680 GO:0005515
Arst5g00907 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 310 341 IPR001680 GO:0005515
Arst5g00907 471 Gene3D - 220 300 IPR015943 GO:0005515
Arst5g00907 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 263 293 IPR001680 GO:0005515
Arst5g00907 471 ProSiteProfiles Trp-Asp (WD) repeats profile. 353 383 IPR001680 GO:0005515
Arst5g00907 471 PRINTS G protein beta WD-40 repeat signature 166 180 IPR020472 -
Arst5g00907 471 PRINTS G protein beta WD-40 repeat signature 423 437 IPR020472 -
Arst5g00907 471 PRINTS G protein beta WD-40 repeat signature 281 295 IPR020472 -
Arst5g00907 471 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 263 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00907 Arst-Chr5 8529969 8534489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00907 221 435 Miscellaneous Gene Families AT5G08390 25.000 1.39e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00907 - - gmx:100819990 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00907 5 8529969 8534489 Arst5g00907 5 8529969 8534489 ECH