Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00639 ATGGGAAGTTTTATTAATCTTTCAACTTCCATCTCCGTCTTCAAATCCGATCTGTGTTCTTCCAAACACATCGCCGACGTGGTGCTCCTTCACGCCAAGCCTCCAACAATATGGAAATCGCGACCACTCTGCCACCAACCCGCATCAATGAGCTTCACTCAAATTTCCTCCTCCAATGGCTTTCCATCTCTTGAAGACAGCGACAGGTCAAACTCTCCCTTTGAGGTTCTCCCTGCTGATTACGGTGTCCACGTGGGAGCGGTGACTTCCGATTCACGCAGGAAAACTAAGATAGTGTGCACGATAGGTCCCGCTACCAGCTCCCGTGACATGATATGGAAGCTTGCCGAAACTGGAATGAACGTGGCGCGATTGAATATGTCCCATGGGGACCATGCATCGCACCAGAAGACCATTGATTTCGTTAAAGAATACAATGCTCAGTTTCAAGACAATGTTATAGCTATCATGCTTGACACCAAGGGTCCTGAAGTTAGGAGTGGGGATGTACCTCAGCCAATTTTACTCAAGGAAGGTCAAACATTCAATTTCACCATTAGGAGGGGTGTCTCCACTGAAGACACTGTCAGTGTCAATTATGATGACTTTGTCAATGATGTTGAGGTTGGAGACATATTACTCGTTGATGGGGGAATGATGTCTCTTGCTGTTAAGTCAAAGACAAATGACTCTGTTAAATGTGAAGTGATTGATGGTGGAGAATTGAAATCTAGGCGTCATTTGAATGTCCGGGGAAAAAGTGCAACACTTCCTTCCATAACTGAGAAGGATTGGGAAGATATCAAGTTTGGGGTAGACAATCAAGTAGACTTTTATGCTGTCTCATTTGTCAAGGATGCAAGAGTGGTTCATGAGTTAAAAGACTACCTCAAAAGTCATAATGCTGATATACATGTGATTGTAAAAATTGAAAGTGCGGATTCTATACCAAATCTTCATTCAATACTTTCAGCTTCAGATGGGGCCATGGTTGCTCGTGGTGACCTTGGAGCTGAACTTCCAATTGAGGAAGTTCCTTTACTGCAGGAGGATATCATAAGAAGATGTCATGGTATGCAAAAGCCGGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTGCTCATCCTACACCAACAAGGGCAGAAGTGTCAGACATTGCAATTGCTGTAAGAGAAGGTACAGATGCCATCATGCTTTCTGGAGAAACTGCTCATGGAAAATATCCATTGAAAGCTGTTAAAGTTATGCACTCGGTGGCTTTAAGGACTGAATCAAGTATTCAGAATAGTGAAGCTTATCCAGGAAACTTAAGTCCGCATAAAAGCCATATGGGAGAAATGTTTGCTTTCCACTCGACAACTATGTCTAATACTCTTAATGCTCCTATCATTGTTTTTACCAGAACAGGATCCATGGCTATTCTTTTGAGCCATTATAGGCCTTACTCGACAATCTTTGCGTTCACAAATCAAGAACGGATTAAGCAGAGGTTGGCACTTTATCATGGGGTCATGCCCATATTCATGCAATTTTCAAATGATGCAGAGGAGACCTTCTCTAGAGCCATTAAGCTTCTCCTGAGTAAGGGTCATTTGCTCGAGGGACAGCATGTTACCCTTGTTCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCCACGCACCACATACAAGTTCGTAAGGTTAAAGGATAA 1698 0.4317 MGSFINLSTSISVFKSDLCSSKHIADVVLLHAKPPTIWKSRPLCHQPASMSFTQISSSNGFPSLEDSDRSNSPFEVLPADYGVHVGAVTSDSRRKTKIVCTIGPATSSRDMIWKLAETGMNVARLNMSHGDHASHQKTIDFVKEYNAQFQDNVIAIMLDTKGPEVRSGDVPQPILLKEGQTFNFTIRRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTNDSVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKDYLKSHNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCHGMQKPVIVATNMLESMIAHPTPTRAEVSDIAIAVREGTDAIMLSGETAHGKYPLKAVKVMHSVALRTESSIQNSEAYPGNLSPHKSHMGEMFAFHSTTMSNTLNAPIIVFTRTGSMAILLSHYRPYSTIFAFTNQERIKQRLALYHGVMPIFMQFSNDAEETFSRAIKLLLSKGHLLEGQHVTLVQSGAQPIWREESTHHIQVRKVKG 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00639 565 SUPERFAMILY PK C-terminal domain-like 412 563 IPR036918 -
Arst5g00639 565 SUPERFAMILY PK beta-barrel domain-like 163 254 IPR011037 -
Arst5g00639 565 Gene3D - 425 543 IPR036918 -
Arst5g00639 565 FunFam Pyruvate kinase 259 424 - -
Arst5g00639 565 NCBIfam pyruvate kinase 94 563 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 93 429 IPR015813 GO:0003824
Arst5g00639 565 PANTHER PYRUVATE KINASE 88 541 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 Gene3D - 163 258 IPR015806 GO:0004743|GO:0006096
Arst5g00639 565 Pfam Pyruvate kinase, barrel domain 94 432 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 Gene3D - 94 424 IPR040442 -
Arst5g00639 565 ProSitePatterns Pyruvate kinase active site signature. 304 316 IPR018209 GO:0004743|GO:0006096
Arst5g00639 565 PRINTS Pyruvate kinase family signature 402 418 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 PRINTS Pyruvate kinase family signature 152 168 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 PRINTS Pyruvate kinase family signature 333 357 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 PRINTS Pyruvate kinase family signature 383 401 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 PRINTS Pyruvate kinase family signature 276 290 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 PRINTS Pyruvate kinase family signature 306 332 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 PRINTS Pyruvate kinase family signature 358 382 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Arst5g00639 565 FunFam Pyruvate kinase 164 257 - -
Arst5g00639 565 Pfam Pyruvate kinase, alpha/beta domain 456 543 IPR015795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00639 Arst-Chr5 5338144 5342183 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00639 K00873 - cave:132174770 853.588