Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00556 ATGGCGTCGGTACAACAAAGCACCTCTTCTGCTTCCTCTAAAAGGTGGCTTCCTCTCGAAGCTAATCCTGATGTCATGAACCAGTTCCTATGGGGGCTTGGGCTTCCACAGGATGAAGCAGAATGCTGTGATGTTTATGGCTTAGATGATCAGCTTCTCGAAATGGTTCCTAAGCCTGTTCTTGCTGTTCTTTTCCTTTATCCTATAACCACTCAGACTGAAGAAGAGAGGTTGCAACAGGAACATGAAAAAAGGGAATATAGCAGTAAAGTGTATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGTACAGTAGGATTGCTTCATGCTCTTGGCAACCCCACGTCTGAGATTAAGCTTGTTGATGGGTCATTCTTGGATAAGTTCTTTAAATCTACTGCAAGCATGGATCCAATGCAGCGTGCAAAATTCCTTGAGAATGATGGAGAAATGGAAGTTGCTCATTCAGTGGCAGCAAATGCTGGCGATACAGAGGCAGCAGATAATGCATATGCTCATTTTATCTGCTTTGCTTGTGTGGATGGTCAACTTTATGAGCTTGATGGAAGAAAGTCAGAGCCAATATCTCATGGTCCATCTTCGCCAAGTACTTTGTTGAAGGATGCAGCTAAAGTGATTAAGAGCATGATCCAGAAAAATCCAGACTCCATCAACTTCAATGTCATTGCTGTCTCAAAGAAATCCAAGGATGAATTCTAA 720 0.425 MASVQQSTSSASSKRWLPLEANPDVMNQFLWGLGLPQDEAECCDVYGLDDQLLEMVPKPVLAVLFLYPITTQTEEERLQQEHEKREYSSKVYFMKQTVGNACGTVGLLHALGNPTSEIKLVDGSFLDKFFKSTASMDPMQRAKFLENDGEMEVAHSVAANAGDTEAADNAYAHFICFACVDGQLYELDGRKSEPISHGPSSPSTLLKDAAKVIKSMIQKNPDSINFNVIAVSKKSKDEF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00556 239 FunFam Ubiquitin carboxyl-terminal hydrolase 10 234 - -
Arst5g00556 239 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 168 179 IPR001578 GO:0004843|GO:0006511
Arst5g00556 239 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 184 194 IPR001578 GO:0004843|GO:0006511
Arst5g00556 239 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 56 68 IPR001578 GO:0004843|GO:0006511
Arst5g00556 239 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 18 35 IPR001578 GO:0004843|GO:0006511
Arst5g00556 239 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 96 113 IPR001578 GO:0004843|GO:0006511
Arst5g00556 239 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14 234 IPR001578 GO:0004843|GO:0006511
Arst5g00556 239 CDD Peptidase_C12_UCH_L1_L3 16 230 - -
Arst5g00556 239 Gene3D - 10 234 IPR036959 GO:0004843|GO:0006511
Arst5g00556 239 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 16 217 IPR001578 GO:0004843|GO:0006511
Arst5g00556 239 SUPERFAMILY Cysteine proteinases 14 233 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00556 Arst-Chr5 4673970 4676428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00556 K05609 - gmx:100527718 393.66