Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00516 ATGGTGAGTGGGTTCTCGAAGGGAACACAGAGCGAGCTTGCAATGGTGGTTTCAAGAAACACGAAAGATCTGGTTGAAGTTATAAAGGAGCTTGATGAGTATTTTCTCAGAGCCGCTGATTCTGGTTCACAAGTTTCGTCGCTGCTTCAAGTTCCAAGTTCTGGTTTTTCTCATCAGAGCAAAGGAAGTAAAGTGTATGGTTATGGATGGCCGTCGCTGTTGACATGGAGTTCGAGTCCGAAGCTGAATGGATTTGGCAAGTTGGCTGAGGAAAATCCTCTTTCTGTGGGTGGTTTTGGGGGTAATACTGTTGGCAGTGGCGGCGGCGGCAGTGGTGGTCACTGCTCAACTGTGGAGAGGTTATATGCATGGGAGAAGAAATTGTACCAAGAGGTTAAGAATGCTAAGATAATAAAGATGGAGCATGAGAAGAAGGCAGCACAGCTAAGGAAGTTTGAGTTGAAGAGGGCTGACTATGTGAAGACGGAAAAGACAAAGAAAGAGGTCGAGAAATTAGAATCACAGATGATAGTTGCCTCGCAGGCCATTGAAACCACCTCCTCCGAAATCATCAAATTAAGAGAAATAGAGCTCTGCCCTCAACTCATTGATCTTGTCAAAGGATTAATGTGCATGTGGCGGAGCATGTATGAATGCCATCAAGTTCAAAAGCACATAGTTCAGCAGCTGGAATACATCAATACCATACCATCGACTACCCCAACTTCCGAGATTCATCGGCAGTCGACTCTTCAGCTTGAGGTTGAAGTACAGCAATGGCACCAATCCTTCTGCAACCTCTTCAAGGCTCACAGAGATTATATCCAATCCCTCACAGGCTGGCTAAGGCTCAGCCTTTTCCAGTTTGGCCGAACCCCACTGAGCAGAACTACCGAGGAGTCAAAGATATATGCCCTCTGTGAAGAATGGAACCTCGCTGTTGATCGCATACCAGACAAGGTCGCATCCGAAGGAATTAAAAGCTTGTTGACTGTTATTCATGCAATTGTAGTTCAACAGACAGAGGAGCATAAACAAAAGAAGAGGTCAGATTCTGCATTCAAAGAGCTCGAGAAGAAGGTTGTTCAGCTTCGATCTCTTGAGTGCAAATATGGTCCATACTCCATGCCAGAGTCCTCTGGTACCATGCGGACCAAGGACCCTGTCAGCCAGAAGCGTGCTAAGGTGGAATCTTTGAGAGCGAAGGCCGAAGAAGAGAAGACTAAACATGAAAAGGCAGTGAGCGTAACACGGGCGATGACATTGAACAACTTGCAGATGTCATTCCCCCATGTTTTTCAGGGAATTGTGGGATTTTCAAATTTGTGCACTGAGGTTTTTGAGTCTGTATACAACAAGGCCAAAGCTGTTGGACAGGAACATGAATTGAAAAGAATATTGCCATAG 1407 0.4556 MVSGFSKGTQSELAMVVSRNTKDLVEVIKELDEYFLRAADSGSQVSSLLQVPSSGFSHQSKGSKVYGYGWPSLLTWSSSPKLNGFGKLAEENPLSVGGFGGNTVGSGGGGSGGHCSTVERLYAWEKKLYQEVKNAKIIKMEHEKKAAQLRKFELKRADYVKTEKTKKEVEKLESQMIVASQAIETTSSEIIKLREIELCPQLIDLVKGLMCMWRSMYECHQVQKHIVQQLEYINTIPSTTPTSEIHRQSTLQLEVEVQQWHQSFCNLFKAHRDYIQSLTGWLRLSLFQFGRTPLSRTTEESKIYALCEEWNLAVDRIPDKVASEGIKSLLTVIHAIVVQQTEEHKQKKRSDSAFKELEKKVVQLRSLECKYGPYSMPESSGTMRTKDPVSQKRAKVESLRAKAEEEKTKHEKAVSVTRAMTLNNLQMSFPHVFQGIVGFSNLCTEVFESVYNKAKAVGQEHELKRILP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00516 468 Coils Coil 389 413 - -
Arst5g00516 468 Pfam Protein of unknown function (DUF632) 24 334 IPR006867 -
Arst5g00516 468 PANTHER UNCHARACTERIZED 14 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00516 Arst-Chr5 4326745 4329778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00516 22 372 Acyl Lipid Metabolism Gene Families AT2G27090 29.306 4.57e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00516 - - adu:107487466 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00516 5 4326745 4329778 Arst5g00516 5 4326745 4329778 ECH