Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00509 ATGTTAGACGGAACCGAAGACGAAGAGAAGTTTCTCGCCGCCGGAATCGCTGGCCTTCAGCAGAATTCCTTCTACATGCACCGCGCATTGGACTCCAACAATCTAAGAGATGCTCTCAAGTATTCCGCTCAGATGCTCTCCGAGCTCAGGACTTCCAAGCTTTCTCCTCACAAGTACTACGAACTCTACATGCGCGCATTTGATCAGTTGAGGAAGCTGGAGATGTTCTTCGAGGAAGAGACTCGTCGTGGTTGCTCCATTATTGATCTCTATGAGCTCGTCCAGCACGCCGGCAACATTTTGCCTCGACTGTATCTCCTCTGTACAGTAGGATCCGTGTACATCAAATCAAAGGAAGCTCCTGCCAAGGATGTTCTAAAGGATCTTGTGGAGATGTGTCGTGGTATTCAGCACCCTGTTCGTGGACTCTTTCTCAGAAGTTATCTTTCTCAAGTTAGTAGGGACAAATTGCCGGATATTGGTTCTGAGTATGAAGGGGATGCTGATACTGTATCTGATGCTGTAGAGTTTGTACTTCAAAATTTCACAGAAATGAACAAACTTTGGGTGCGCATGCAACATCAGGGGCCTGCCCGGGAGAAGGAGAAACGGGAGAAAGAAAGGAGTGAGCTGCGCGATCTTGTTGGGAAGAATCTCCATGTTCTCAGTCAGATAGAGGGTGTTGATCTTGATATGTACAAAGATATTGTGCTTCCCAGAGTATTAGAGCAGGTTGTTAATTGCAAAGATGAGTTGGCCCAGTTTTACTTGATGGATTGCATAATTCAAGTCTTCCCTGATGAGTATCACTTGCAAACTCTTGATGTATTGTTGGGTGCTTGCCCTCAGCTTCAGCCGTCCGTTGATATCAAGACAGTACTGTCTCAATTAATGGAAAGGCTTTCACATTATGCTGCATCAAGTGCAGAGGTGTTGCCAGAATTTTTGCAAGTGGAAGCATTTGCCAAATTAAGCAATGCCATTGGCAGGGTGATAGAGGCACAGCCTGACATGCCCACTCTTGGAGTTGTAACTTTATATTCATCTCTTCTCACATTCACTCTTCATGTTCACCCGGATCGACTTGATTATGCAGATCAAGTCCTGGGAGCATGTGTGAGAAAACTCTCTGGCAAAGGGAAAATTGAAGACAGCAAGGCAACAAAGCAGGTTGTTGCTCTATTAAGTGCTCCATTAGAAAAATATAATGATATTATGACTGCCTTGAAGCTTTCAAATTATCCTCGTGTACTGGAATATCTCGATGTTCCAACTATTAGGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAATGGAACTCGCATTTCTACTTCAGACAAGGTTGAAGCATTGTTTGAATTGATAAAGGGGCTTATCAAGGATTCTGACGGGACCTCAAATGACAAGCTGGACGAAGATGACTTCAAAGAGGAGCAAAATTCTGTTGCCCGCCTAATCCAGATGTTTTATAATGATGATCCTGAAGAGATGCTTAAGATCATAGAAACTGTGAGGAAGCACATATTGGCTGGAGGACCAAAACGCTTGCCTTTCACTGTTCCACCTCTTGTTTTTTGTTCGTTAAAGTTGGTCAGACAGTTGCAAGGCCAAGAAGAAAATCCTTTTGGAGATGATGCATCAACAACACCAAAGAAAATTTTTCAGCTTTTAAACCAGATTATCGAGACTCTGTCCGGTATACCTGTGCCGGAATTGGCATTGCAGTTGTATTTGCAATGTGCTGAGGCTGCAAATGACTGTGAGTTGGAACCCGTTGCTTACGAGTTTTTCACCCAAGCTTATATTCTATACGAAGAAGAGATTTCTGATTCAAGAGCGCAGATCACGTGTATCCATTTAATAATAGGAACTCTTCAAAGGATGCATGTCTTTGGTGTTGAGAACAGGGATACTTTAACTCACAAGGCCACAGGGTATTCAGCAAAGCTTCTGAAGAAGCCAGATCAGTGCCGAGCTGTGTATGCATGCTCACATCTGTTTTGGGTTGAAGATCATGATAACATGAAAGATGGAGAGAGAGTCTTGTTATGCCTCAAGCGGGCTTTAAGAATTGCAAATGCTGCACAACAAATGGCCAATGCAGCACGAGGTAGCACTGGATCAGTTATGCTCTTCATTGAGATATTGAACAAGTATCTATACTTCTTTGAGAAGGGGAACCCACAAATCACCGTTGCTTCAATCCAGAGCCTAATTGAGTTAATCATGAACGAAATGCAAAGTGACTCTACGACATCAGATCCAGCTGCTGAGGCTTTCTTAGCTAGTACTATGCGATATGTACAATTCCAGAAACAGAAGGGTGGTGCAGTTGGTGAGAAGTATGAACCCATCAAGTATGAACCCATAAAGGCTTGA 2385 0.4331 MLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVSDAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDIVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIKTVLSQLMERLSHYAASSAEVLPEFLQVEAFAKLSNAIGRVIEAQPDMPTLGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVRKLSGKGKIEDSKATKQVVALLSAPLEKYNDIMTALKLSNYPRVLEYLDVPTIRVMATVIIQSIMKNGTRISTSDKVEALFELIKGLIKDSDGTSNDKLDEDDFKEEQNSVARLIQMFYNDDPEEMLKIIETVRKHILAGGPKRLPFTVPPLVFCSLKLVRQLQGQEENPFGDDASTTPKKIFQLLNQIIETLSGIPVPELALQLYLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQITCIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVEDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILNKYLYFFEKGNPQITVASIQSLIELIMNEMQSDSTTSDPAAEAFLASTMRYVQFQKQKGGAVGEKYEPIKYEPIKA 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00509 794 Gene3D - 464 774 IPR042491 -
Arst5g00509 794 SUPERFAMILY ARM repeat 219 750 IPR016024 -
Arst5g00509 794 Pfam Vacuolar protein sorting-associated protein 35 12 746 IPR005378 GO:0015031|GO:0030906|GO:0042147
Arst5g00509 794 PIRSF Retromer_Vps35 1 792 IPR005378 GO:0015031|GO:0030906|GO:0042147
Arst5g00509 794 PANTHER VACUOLAR SORTING PROTEIN 35 5 788 IPR005378 GO:0015031|GO:0030906|GO:0042147
Arst5g00509 794 FunFam Vacuolar protein sorting-associated protein 35 465 774 - -
Arst5g00509 794 PANTHER VACUOLAR SORTING PROTEIN 35 5 788 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00509 Arst-Chr5 4296747 4304703 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00509 K18468 - gmx:100811902 1462.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00509 5 4296747 4304703 Arst5g00509 5 4296747 4304703 ECH