Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00441 ATGGCATCTGGTGAAGGTGATACTCTGGGAACTATGGAAAATTGTGTAGAAGATTCTTCAATACCGGAGTCGCAATTGTCTGATGAGCACCATCATCATCATAAACATGGTAGCAACAGAGATCTTCAGATGGAAAATGGTATATTCGACGGCGATCAAGGTCCAGCTGATAGTTATGATCAGCTTCTAGAAATGGTTGCTGACCTCAGATTTCAGAATGAATTCTTGAAGTCCCAGTTTGATGGATTTCGCAATGTAAACCATGTACATAGTGACTCTAGTCTGCAGAAAGGAGTTGGTGGTCCAGAAGGTGGGGAATCTGACAATGTGAAAGAACTTCAGAAAAGGATACAAGCACTAGATAAAGAACTTCTGGTAGAAAAACAAACAAGACTTGCATCTGAAGAGGCTTTGAAGCACCTTCAAACGGTATACTCAGAGGCAGAAGCAAAGGCCAGGGAGCTGTCTGAAAAGCTCGCAGAAGCTCAATCAAAACTGGAGCAAGAAATAAAAGATCGTGAAGAGAAGTACTCTGAACTTGACTCAAAGTTTAACAGGCTTCATAAACGAGCAAAGCAGCGTATTCAAGATGTTCAAAAGGAAAAAGATGATCTTGAGGCTCGATTCAATGAGGTGACTGAAACTGCTGAGAAAGCAACATCCCAACGGTCAGCATTACAACAAGAGCTAGAACGCACGAGGAAGCAAGCAAATGATGCATTGAAAGGAATGGATGCTGATAGGCAACATCTAAGAGGTGAAAACAACAGACTTCGAGATACTATTGAGGATTTACGGCGTTCTTTGCAACCTAAAGAGAGTGCCATTGAGTCATTGCAACAATCTCTTGCAGAAAAAGAACAGCAAATCAACCAATAATCGTTTATATAGGCTGCTGATGAAAAAAAACAAGCTGCACTAGTGGAGCTCTCAGCTAAACATCAAAAGAATATAGAAAGTTTGGAGGCTCAACTTAATGATGCATTGTCCGATAGAAGCAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAGAAAGAGTCTAAAATTGCAGAGATGGAGGCAGCCTCATCTGGGGAGGCAGCACGACTTAGAGCATCTCTGGAAAGTATGAAGGGGGAGCTTTCTCACCTAAAACAAGAGCATGAAAAAGCAAGAGCAAGCTGGGAGACTGCATCTCAGGCACTCAAAATGAAACTTGAAACTGCTGAAAGCAACTGCATACGTGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCGGAGGTCTCTGCTCAGACCAGGATTCTCAGTATGAGAGATGCTGAACTTTTGGCTGCCAAGGAAGAGATATGCAGTCTTGAGAGGGAATTTTCTTCATACAAAGTTCGAGCACATGCACTTCTTCAAAAGAAGGATGCAGAACTGGCTGCAGCTAAAGACTCTGAACAACTCAAAGCTCTTGAGGAAGCCCTAAAGGAGGCTGAAAATGAAGTATTATCGGTAACAGAAGAAAAGGATAAAGTTATTCAAGATCTTCAGTCTGCTATGGCTAATCATGAGAGAGAGCTTGTAGAAAGAGAGACGGCCCTTGAAAATGCCAAGCAACTAATAAGGAGCTTAGAAACAAAGCTTGACTCAGCTAATGCTCAGCACCTTAAGGAGAAAGAAGAATGGGGACTAAGCCTTAAAAATGTAGAAGAAACGTGGCGAATCAAATGTGACTCAATGAAGGCTGAAAACGAAGCAACTGCTGCACAAGATATGCAAAAGGAGTTGCAAGAGCTCAAACTGCAATATAAAAAATTGAAGGATGAACATGCTTCATTTCATGATATTGCTGATAAAATGATTGAGGAGAAGGATAATGAAATATCTAGACTTTCAGATGATAATAGGAATCTTCGTCAATCTCTTCAATCAAGACCACAGGTTGACCACAGTGACAATGATAATTATAACACAGGCTCGCATAAAGTGGATTCAATGAATTTAAGTCCCTCTGCTGCAGAACAGCAAATTCTGCTCCTAGCTAGACAACAAGCTCAAAGAGAAGAAGAACTAGCACGATCACAGCGCCATATCTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGAGAGAATCGTCTCCACAGCCAACAGGAAGCAATACTAAAGGCTGAGCTTCGTGACATGGATAGATCAAAGAAAAGGGAAGGCGTAGATATGACATATTTGAAAAATGTTATCTTAAAGCTTCTTGAGACAGGTGAAGTGGAGGTATTGCTACCAGTTATTGGGATGCTTCTCCAGTTTAGTCCACAAGAGATGCAGAAGTGTCAACAGGCATATCAAAACTCAGCAGATGCATCACCAAATCCTACGAATGATGCCTCAGGATCTGGCCTCTCTCTTTTCTCAAGATTCTCATTTACATAA 2415 0.4141 MASGEGDTLGTMENCVEDSSIPESQLSDEHHHHHKHGSNRDLQMENGIFDGDQGPADSYDQLLEMVADLRFQNEFLKSQFDGFRNVNHVHSDSSLQKGVGGPEGGESDNVKELQKRIQALDKELLVEKQTRLASEEALKHLQTVYSEAEAKARELSEKLAEAQSKLEQEIKDREEKYSELDSKFNRLHKRAKQRIQDVQKEKDDLEARFNEVTETAEKATSQRSALQQELERTRKQANDALKGMDADRQHLRGENNRLRDTIEDLRRSLQPKESAIESLQQSLAEKEQQINQXSFIXAADEKKQAALVELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESKIAEMEAASSGEAARLRASLESMKGELSHLKQEHEKARASWETASQALKMKLETAESNCIRAEVEVAKIRSQLESEVSAQTRILSMRDAELLAAKEEICSLEREFSSYKVRAHALLQKKDAELAAAKDSEQLKALEEALKEAENEVLSVTEEKDKVIQDLQSAMANHERELVERETALENAKQLIRSLETKLDSANAQHLKEKEEWGLSLKNVEETWRIKCDSMKAENEATAAQDMQKELQELKLQYKKLKDEHASFHDIADKMIEEKDNEISRLSDDNRNLRQSLQSRPQVDHSDNDNYNTGSHKVDSMNLSPSAAEQQILLLARQQAQREEELARSQRHILALQEEIEELERENRLHSQQEAILKAELRDMDRSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPQEMQKCQQAYQNSADASPNPTNDASGSGLSLFSRFSFT 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00441 804 Coils Coil 138 183 - -
Arst5g00441 804 Coils Coil 616 636 - -
Arst5g00441 804 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 72 788 - -
Arst5g00441 804 Gene3D - 228 400 - -
Arst5g00441 804 Coils Coil 311 359 - -
Arst5g00441 804 Coils Coil 294 296 - -
Arst5g00441 804 ProSiteProfiles GRIP domain profile. 728 775 IPR000237 -
Arst5g00441 804 MobiDBLite consensus disorder prediction 630 663 - -
Arst5g00441 804 Coils Coil 364 391 - -
Arst5g00441 804 Coils Coil 188 292 - -
Arst5g00441 804 Coils Coil 396 423 - -
Arst5g00441 804 MobiDBLite consensus disorder prediction 622 663 - -
Arst5g00441 804 Coils Coil 574 611 - -
Arst5g00441 804 Pfam GRIP domain 732 771 IPR000237 -
Arst5g00441 804 Coils Coil 469 556 - -
Arst5g00441 804 Coils Coil 110 130 - -
Arst5g00441 804 Coils Coil 686 720 - -
Arst5g00441 804 MobiDBLite consensus disorder prediction 23 41 - -
Arst5g00441 804 MobiDBLite consensus disorder prediction 1 57 - -
Arst5g00441 804 SMART 1grip 731 775 IPR000237 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00441 - - gmx:100775990 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00441 5 3730131 3739319 Arst5g00441 5 3730131 3739319 ECH