Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00438 ATGGCGGTTCCACTCAGAATGAGCAACAACAATAAGCGTGCTGTGCTTGCTCGTTTGAAATCCCTCATCAACACACAGCAGTTGCAGAGGTTCTGCACTTCTATGCAGCCCAAAGGGAAACTGGATGATCGCTTGTCTCCAAAAGGGGACTTAGATTACTCGGCTCTGAAAGAACGCAATGACTTCTTGAAATGGAAGACTCTGGACGCTAGTAAGCTTGGATTTAAGTCCTATTTGGTAGGTGGGTGTGTGAGAGATCTACTATTGAATAGAACTCCAAAAGATTTTGATGTCATCACCACAGCGGAGCTTCATGAGGTGAAAAAGCATTGTCGTAAAATAGGCCATGCTATAATTGTAGGGCGACGTTTTCCAGTATGCCTTGTTAATGTAAAAGGTTCTCAAATAGAGATAACCAGTTTTGCGACAGAGGCACAGACATTTGAAGGGAGTGACCAAGTTCGACGCACTCTATTGCCCAAATCCAAATGCAATAATGAAGAAGACTTAATTCGCTGCAAAAACTCCTTGTACAGAGACTTCACAATTAATAGTTTATTTTATGACCCCTCTGCTAATAAGATATATGATTATGCCAATGGAATCGCTGATTTGAGGTCCTTGAAGCTTGAAACTGTGATCCCTGCTCAACTGTCCTTCAAAGAGGACCCTGGGAGAATTTTGCGTGGCTTCAGAATGGCAGCTCGACTAGGTTTATCATTATCAAGGGAGATTGAGGCTGCTATTTTGGCTTATTCTTCACAAGTTAAGAACATGAACAAGACTAAATTACTGACTGAGGTGAACTATATGCTGTCTTATGGAGCTGCTGAGCCATCTTTGCGCTTGCTCTGGAAATTCAAGTTGCTTGAGTTTTTATTTCCTGTGCATGCAGCATATCTTGATGAACAGGTGGATAAAGAAGGTGTTCTTGCTTCCAATATGTTGATGAAATTATTCCTCCATCTGGATAATTTGGTGGCATGTGATCGGCCTTCTGATTGCACTCTATGGATTGGGTTGCTAGCATTTCACCTGGCATTAATAAATAACCCGCAAGAAGCCCTTGTGGTGTGGGCTCTTGCTTCTATTCTATATCATGGGAATTGGAAAGACGGTGTTAAATTCGCTAAAGAACATGCAGAAGTGACTGTTAATTTTGCACCTGAAATAAGGATGTCCTGTTTGAACAAATCGGAAGAAGAAATTGCAAAAGCAGTCACTGAATTGGCATCTCATGTGATACACTCTGTATGTGTGCTGGTTAATAATGATAGTCTTCGTCAATCCATGGCTAGATATCCATCTTCTCCATGCTCTGGCACTGTATTTGTACCAGGGAAAAAAGGGCAGATTGTTGGTGATATTTTCAGAGTGCTAGTCAATGATGTCCAACTGTATAGGAGTGAAAGAAAAGGTTCAAAGATAAAATATGGCATGCTTAGCCGGGGCAGTATTGAAGAGACTAGATATGTTTTCGGCAAAATTGTTCTCAACACTATGATTAGTTGCATTGTTGGGAACAAGGATGATTTTGAGGCTGAAAAATGTCATCTTAAGACTCAGGACACTGAGGAAAGTGGCCAGTCGCAAATTTCAAATTCAGTAATCCATAAATCGGTTGCAAGGAAACATGAAAGACAAGCTTTATCACCAAGTCCAGAAAGTAAGCAAGGAAAAATCAAGAAACAGAAACTGGTTGACAATGACCGTGTTCCAGAGCAGAAAGTGGACATGGCGAGCCATGAATTGGTTTTCAAGGAAACCAGTCAAGAGTGGCAGAAGCAAGCAAAATTAACTCAGAAGGTTGATCCATCTATGATGAAGGGCTTTGTGCCGAAAATGAAAAAACATCCAATAAAGCATCCAGCGAGGCCTATGAAGACAGTCAAACAGAACTCACACACACCATCACAATTTAAAGTGTCTAAGAATCATCATGAAGTAGCTGACAGCTGCAACATAAATGTGGATGCAAAAGCAACAAATAAGTCACACTTAAAGAAGAAAAGGTCCCAATCATCATCTGATGAAAAAGTTTTGAAGCATTCCCTCTCCAGTCTCTTCAGAAAATGA 2076 0.4085 MAVPLRMSNNNKRAVLARLKSLINTQQLQRFCTSMQPKGKLDDRLSPKGDLDYSALKERNDFLKWKTLDASKLGFKSYLVGGCVRDLLLNRTPKDFDVITTAELHEVKKHCRKIGHAIIVGRRFPVCLVNVKGSQIEITSFATEAQTFEGSDQVRRTLLPKSKCNNEEDLIRCKNSLYRDFTINSLFYDPSANKIYDYANGIADLRSLKLETVIPAQLSFKEDPGRILRGFRMAARLGLSLSREIEAAILAYSSQVKNMNKTKLLTEVNYMLSYGAAEPSLRLLWKFKLLEFLFPVHAAYLDEQVDKEGVLASNMLMKLFLHLDNLVACDRPSDCTLWIGLLAFHLALINNPQEALVVWALASILYHGNWKDGVKFAKEHAEVTVNFAPEIRMSCLNKSEEEIAKAVTELASHVIHSVCVLVNNDSLRQSMARYPSSPCSGTVFVPGKKGQIVGDIFRVLVNDVQLYRSERKGSKIKYGMLSRGSIEETRYVFGKIVLNTMISCIVGNKDDFEAEKCHLKTQDTEESGQSQISNSVIHKSVARKHERQALSPSPESKQGKIKKQKLVDNDRVPEQKVDMASHELVFKETSQEWQKQAKLTQKVDPSMMKGFVPKMKKHPIKHPARPMKTVKQNSHTPSQFKVSKNHHEVADSCNINVDAKATNKSHLKKKRSQSSSDEKVLKHSLSSLFRK 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00438 691 MobiDBLite consensus disorder prediction 524 538 - -
Arst5g00438 691 Gene3D - 212 432 - -
Arst5g00438 691 MobiDBLite consensus disorder prediction 522 573 - -
Arst5g00438 691 Pfam Probable RNA and SrmB- binding site of polymerase A 238 300 IPR032828 -
Arst5g00438 691 SUPERFAMILY Poly A polymerase C-terminal region-like 210 374 - -
Arst5g00438 691 SUPERFAMILY Nucleotidyltransferase 70 206 IPR043519 -
Arst5g00438 691 CDD NT_ClassII-CCAase 70 206 IPR002646 GO:0003723|GO:0006396|GO:0016779
Arst5g00438 691 MobiDBLite consensus disorder prediction 558 573 - -
Arst5g00438 691 Gene3D Beta Polymerase, domain 2 65 211 IPR043519 -
Arst5g00438 691 MobiDBLite consensus disorder prediction 617 691 - -
Arst5g00438 691 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 72 519 - -
Arst5g00438 691 Pfam Poly A polymerase head domain 78 209 IPR002646 GO:0003723|GO:0006396|GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00438 Arst-Chr5 3709775 3715075 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00438 - - gmx:100794882 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00438 5 3709775 3715075 Arst5g00438 5 3709775 3715075 ECH