Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00424 ATGGCCGTATCCGAAGCCTCAGCCTACCCTCCCATCGAGCCAACAAACTTCGATCTCATCATCGTTGGCACTGGCCTTCCGGAATCCATTCTCGCCGCCGGCTCCCTAATTGATCTCACTTCTCATCTCAACTCCCATTCCGTCCCCGCACCACCACTACCACCATCTGCCGCCGGATCCGGTGATTCCGATTACGCCGTCGTGGACCTCGTCCACGATCCACTCTACTCCGATATTGAGGTCGAATGGCATGGTTCCGAGGACGAAACCTCGAAGATTCGAGAAGATTCCAGAAAATTCAACATCGATTTGGGAGGACCTAGGGCGCTGTTCTGCGCCGATAGTTGCATCGATCTGTTGCTGAAATCCGGAGCGGCACAGTATCTCGAATTCAAGGGCGTGGATGCGAGCCTCGTGTACGAGCCTAATGGCAGCGGTTTGGCGAACGTGCCGGATTCTCGCGGAGCGATTTTCAGGGACAAGAATCTTTCGCTGAAGGAGAAGAACCAGCTGATGAGGTTCTTCAAGCTCGTGCAGCAGCACCTTGCTGGTGGTGGCGATCAAAGTGAAAGTGGCGGCGACATTCAGAAGATTTCGCAGGAAGATCTGGAGAGTCCATTCGTTAGTTTCCTGGATAAGATGCGGTTGCCGCCAAAGATAAAATCAATTCTTTTGTATGCTATCGCCATGTTAGATTATGACCAAGACAATAATGAGGTTTGCAAAGATTTGCTCAAGACAAAGGATGGTATTGATCGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCTAATGCACCAGGGGCTTTGCTTTATCCTATTTACGGTGAAGGAGAACTACCACAAGCTTTCTGTCGCCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTCAGGATGCCAGTTACTTCTCTGCTTATTGATAAGGTTACTGGGTGTTATAAAGGTGTCAGACTAGTTTCAGGTCAAGATTTATATAGCCATCAGCTAATCATGGATCCGTCATTTGTGATTCTATCACCACTGTCCCCATCTCTAGGCGATTTTCCCAGAGAGAAGATCCAATTATTGAGTCAGAGAGATTTGAAAGGAATGGTGGCCAGGGGGATATGCATCACAAGGAGTTCCATAAAGCCTGATTTATTAAATTGCTCAGTGGTGTATCCCCCTAGATCTTTGTATCCTGAACAAGTGACGTCGGTCAGAGCTCTTCAAATAGGATCAAACCTTGCTGTTTGTCCCGCGGGCACCTTTATTTTATACTTCTCCACTGTGTGCAATGATGCTGATGAAGGAAAGAAGTTATTAAAAGCAGCCATGAATGCTCTTCTTACACCGCCTGTGTCTGTAACCTCTGAAAGTAATCCAATTGTTCAAAGTGATAATGAAGATGTAAAACCCATTGTGCTCTGGAATGCATTTTATATCCAGAAAGTATTCACGGGTAAATTTGACTCTATGACCTCCGCTCCAACACCAGATGGAAATCTAAACTACGCTGACATTTTAGATGCGACTGAGAAGCTATTCGGTCAAATGTACCCAGATCAAGCATTCTTTCCAAAGACAGAATCACCTGAAGATACTATGGATGAGAATGGAGTGATTATGGAAAGCTAA 1620 0.4623 MAVSEASAYPPIEPTNFDLIIVGTGLPESILAAAXSLIDLTSHLNSHSVPAPPLPPSAAGSGDSDYAVVDLVHDPLYSDIEVEWHGSEDETSKIREDSRKFNIDLGGPRALFCADSCIDLLLKSGAAQYLEFKGVDASLVYEPNGSGLANVPDSRGAIFRDKNLSLKEKNQLMRFFKLVQQHLAGGGDQSESGGDIQKISQEDLESPFVSFLDKMRLPPKIKSILLYAIAMLDYDQDNNEVCKDLLKTKDGIDRLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVTSLLIDKVTGCYKGVRLVSGQDLYSHQLIMDPSFVILSPLSPSLGDFPREKIQLLSQRDLKGMVARGICITRSSIKPDLLNCSVVYPPRSLYPEQVTSVRALQIGSNLAVCPAGTFILYFSTVCNDADEGKKLLKAAMNALLTPPVSVTSESNPIVQSDNEDVKPIVLWNAFYIQKVFTGKFDSMTSAPTPDGNLNYADILDATEKLFGQMYPDQAFFPKTESPEDTMDENGVIMES 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00424 540 Pfam GDP dissociation inhibitor 16 442 IPR018203 GO:0005092|GO:0007264
Arst5g00424 540 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 77 480 - -
Arst5g00424 540 PRINTS Rab GDI/REP protein family signature 278 299 IPR018203 GO:0005092|GO:0007264
Arst5g00424 540 PRINTS Rab GDI/REP protein family signature 117 133 IPR018203 GO:0005092|GO:0007264
Arst5g00424 540 PRINTS Rab GDI/REP protein family signature 18 36 IPR018203 GO:0005092|GO:0007264
Arst5g00424 540 PRINTS Rab GDI/REP protein family signature 168 183 IPR018203 GO:0005092|GO:0007264
Arst5g00424 540 SUPERFAMILY FAD/NAD(P)-binding domain 14 348 IPR036188 -
Arst5g00424 540 Gene3D - 272 520 IPR036188 -
Arst5g00424 540 SUPERFAMILY FAD-linked reductases, C-terminal domain 364 478 - -
Arst5g00424 540 FunFam Rab proteins geranylgeranyltransferase component 151 271 - -
Arst5g00424 540 PANTHER RAB GDP-DISSOCIATION INHIBITOR 13 526 IPR018203 GO:0005092|GO:0007264
Arst5g00424 540 PIRSF Rab_ger_ger_transf_A_euk 76 537 IPR001738 GO:0005968|GO:0006886|GO:0018344
Arst5g00424 540 PIRSF Rab_ger_ger_transf_A_euk 5 46 IPR001738 GO:0005968|GO:0006886|GO:0018344
Arst5g00424 540 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 151 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00424 Arst-Chr5 3599202 3604653 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00424 K23460 - gmx:100795946 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00424 5 3599202 3604653 Arst5g00424 5 3599202 3604653 ECH