Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00380 ATGAGATTTTGCCCTAACTACACTCTCCAAAATCTCATTTCTAAGGTCCGCAATCACGTCGCCGCTCTTCGCCGGGCCTCCACCACCACTGCCAACGCCGCAGCATACTCTGCCTCCACCATGAGCACCCTCAAAACCAAGCTCTGCATCATAGGAAGCGGTCCTGCCGCCCACACTGCCGCCGTCTACGCTGCCCGCGCCGAGCTCAAGCCAATCCTCTTCGAAGGATGGATGGCCAACGACATCGCCCCCGGAGGCCAGCTAACCACGACAACCGATGTCGAGAACTTCCCCGGCTTCCCCGACGGCATCCTCGGCGGTGAGCTCATGGAACGCTGCCGCAAGCAGTCGGAGCGATTCGGCACCGAGATCTTCACGGAGACCGTCACGAAGGTAGATTTCTCGAAGCGTCCTTTTAGCGTTTTCACTGATTCCAAAACCGTCGTGGCCGATTCCGTCATCGTGGCCACCGGCGCCGTCGCCAAGCGCCTCCCCTTCGAGGGCTCCGGTGAAGGCCCCAACGGTTTCTGGAACCGCGGGATCTCCGCGTGCGCTGTGTGCGATGGCGCCGCCCCGATCTTCCGTAACAAGCCGCTCGCCGTTATCGGAGGCGGCGATTCCGCCATGGAGGAAGCGACATTCCTCACGAAGTACGGTTCCGAGGTTTACATCATCCACCGTAGGGATACGTTTAGGGCTTCGAAGATTATGCAGAGCAAGGCCTTGAACAACAAGAAGATCAAGGTGCTTTGGAACTCGGTGGTGGAGAAGGCTTACGGTGACGAAGGGAACAAGAAGCTTGGGGGTTTGAAGGTGAAGAACGTGGTGACTGGGGAGGTTTCTGATTTGAGCGTGAATGGGTTGTTTTTTGCGATTGGGCACGAGCCTGCGACTAAGTTTCTTGGTGGACAGCTTGACCTTGATGCTGATGGCTACATTGTGACGAAGCCCGGGACGACGAAAACCAGTGTTGAGGGTGTTTTTGCTGCCGGCGATGTTCAGGACAAGAAGTATAGGCAAGCTATTACTGCTGCTGGCTCTGGGTGTATGGCAGCCTTGGATGCAGAACACTATCTGCAAGAGATTGGTTCACAACAGGATAAGAGCGATTGA 1113 0.5651 MRFCPNYTLQNLISKVRNHVAALRRASTTTANAAAYSASTMSTLKTKLCIIGSGPAAHTAAVYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPDGILGGELMERCRKQSERFGTEIFTETVTKVDFSKRPFSVFTDSKTVVADSVIVATGAVAKRLPFEGSGEGPNGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEATFLTKYGSEVYIIHRRDTFRASKIMQSKALNNKKIKVLWNSVVEKAYGDEGNKKLGGLKVKNVVTGEVSDLSVNGLFFAIGHEPATKFLGGQLDLDADGYIVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGSGCMAALDAEHYLQEIGSQQDKSD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00380 370 Gene3D - 50 358 IPR036188 -
Arst5g00380 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 312 334 - -
Arst5g00380 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 150 168 - -
Arst5g00380 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 285 301 - -
Arst5g00380 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 198 216 - -
Arst5g00380 370 PRINTS FAD-dependent pyridine nucleotide reductase signature 48 67 - -
Arst5g00380 370 FunFam Thioredoxin reductase 170 297 - -
Arst5g00380 370 Pfam Pyridine nucleotide-disulphide oxidoreductase 47 347 IPR023753 GO:0016491
Arst5g00380 370 Gene3D - 166 297 IPR036188 -
Arst5g00380 370 SUPERFAMILY FAD/NAD(P)-binding domain 29 359 IPR036188 -
Arst5g00380 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 106 116 - -
Arst5g00380 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 322 340 - -
Arst5g00380 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 151 159 - -
Arst5g00380 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 194 218 - -
Arst5g00380 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 85 100 - -
Arst5g00380 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 47 69 - -
Arst5g00380 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 246 262 - -
Arst5g00380 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 189 - -
Arst5g00380 370 PRINTS Pyridine nucleotide disulphide reductase class-II signature 287 308 - -
Arst5g00380 370 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 184 206 IPR008255 GO:0016491
Arst5g00380 370 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 45 362 - -
Arst5g00380 370 NCBIfam thioredoxin-disulfide reductase 47 359 IPR005982 GO:0004791|GO:0005737|GO:0019430
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00380 Arst-Chr5 3266952 3270453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00380 K00384 - gmx:100790557 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00380 5 3266952 3270453 Arst5g00380 5 3266952 3270453 ECH
Arst5g00380 5 3266952 3270453 Arst1g01199 1 11700142 11703556 PCT