Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00338 ATGACTATTTCCGAAGACGAGGACGAAACCCTAGCTCACTTTCTCGAATCGGAGGTTCTCTCCGAAACCTCTGACCAGGAGGAGGAGAATCCGGAGGAGCCTGAACCAAAGAGAAAGAGGGTAGAGGAGGCGGAGAGTTCTAAGGAAGGTGCCAAACAAAGTTTAAGTTCAAATTCATTGTTGGAGCCGAAGAATTACAGTGTGAATAACGTAGTGGTGCCGAAGAGGATTGAGACCGGTTCTTTCAGCAAAGTCCCACCTGAGCTCTTTCACCATATCCTTAAATTCCTGTCCTCAGAGGACCTTATTTCTTGTTCCTTGGTCTGTAGGTTTCTAAATTATGCAGCATCCGATGAAGCATTGTGGCGTCGATTGTACTGTATGCGATGGGGTCTTCTTCCCCCTACAAGAAAGTTAAGGGAATGTCCATGGAAAAATTTATATATTCAGCGTGATGGAGAGGATATGGTTGAACTTGTCAGAAGCTGCCAAAATGAGTTTAAGGAGTATTACATTCAAATGCAAGCAGCTAAGCGGAGTCAAGCCCCTCATCCTTCGCAGGTGAAGGACGACAGAATAATCCTTGACAAAACATTAGCTGATCAAGTGTCATCATGGAAAAGCAGCAAGGGACTCAGCGATGCAGTGGTAACTGATCATGCTTGTTCTGGGGAAACATGCTCTTACTATGAAATCGGAGATGTATTTATTTGTGAGAAGACCGGGCAAGTTCATGTTTGTGATGAGACTTGTAGAGAAGTAATCATGGATCCCACCAATGAGCTTTTGGTCTGTACAATATCAGGGCACTGTTTCGATAGATTTCTGTCACCGTCCGAGATGGAGCCGGATACTGAACTGCAGCAAGGTGGTGCAACTGATGAGGCAGAACCATTTATGGGGTCAGGCCGTTTTGCAAGAGCTTATTCGCTGGGATACAATTGTGCTGATGAGAAGGAGCTGAAAGCAACTTTAAGGTTTTGCTGA 987 0.4509 MTISEDEDETLAHFLESEVLSETSDQEEENPEEPEPKRKRVEEAESSKEGAKQSLSSNSLLEPKNYSVNNVVVPKRIETGSFSKVPPELFHHILKFLSSEDLISCSLVCRFLNYAASDEALWRRLYCMRWGLLPPTRKLRECPWKNLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAPHPSQVKDDRIILDKTLADQVSSWKSSKGLSDAVVTDHACSGETCSYYEIGDVFICEKTGQVHVCDETCREVIMDPTNELLVCTISGHCFDRFLSPSEMEPDTELQQGGATDEAEPFMGSGRFARAYSLGYNCADEKELKATLRFC 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00338 328 CDD F-box_AtSKIP31-like 82 127 - -
Arst5g00338 328 ProSiteProfiles F-box domain profile. 79 125 IPR001810 GO:0005515
Arst5g00338 328 MobiDBLite consensus disorder prediction 1 15 - -
Arst5g00338 328 FunFam F-box family protein-like 69 156 - -
Arst5g00338 328 Gene3D - 67 156 - -
Arst5g00338 328 MobiDBLite consensus disorder prediction 1 59 - -
Arst5g00338 328 SMART fbox_2 85 125 IPR001810 GO:0005515
Arst5g00338 328 MobiDBLite consensus disorder prediction 31 49 - -
Arst5g00338 328 PANTHER F-BOX ONLY PROTEIN 3 4 326 - -
Arst5g00338 328 SUPERFAMILY F-box domain 76 151 IPR036047 GO:0005515
Arst5g00338 328 Pfam F-box-like 84 127 IPR001810 GO:0005515
Arst5g00338 328 Pfam UL92 family 226 289 IPR004289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00338 Arst-Chr5 2893099 2896079 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00338 - - gmx:100778591 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00338 5 2893099 2896079 Arst5g00338 5 2893099 2896079 ECH