Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00329 ATGGAGCAGCTGAAAACAATCGGTCGCGAGCTGACAATGGGTTCGCAAGGCGGATTCGGCCAATCAAAGGAGTTCCTGGATCTGGTAAAATCCATCGGAGAAGCCCGATCCAAGGCCGAAGAAGACCGCATCGTCCTCCGCGAGATCGAAACCCTAAAACGCCGCCTCCTCGAGCCCGATATCCCAAAACGCAAGATGAAGGAGTACATCATACGCCTCCTCTACGTCGAGATGCTTGGCCACGACGCCTCCTTTGGTTACATCCACGCCGTTAAGATGACTCACGACGACGCCTTACCTCTCAAACGCACCGGTTACCTCGCCGTCACGCTTTTCCTCTCCGACGACCACGACCTCATCATCCTCATCGTCAACACAATCCAGAAGGATCTGCGTTCCGATAACTACCGGTTGTGGAGCTCTTGGGCCACTCTAAGGAGGCCGTTAGGAAGAAGGCCGTTATGGCGTTGCACCGCTTTTACCAGAAGTCACCCGGGGCGGTTTCGCACTTGGTTTCCAATTTTAGGAAGAGGCTGTGCGATAATGATCCTGGTGTCATGGGTGCCTCCCTTTGCCCGCTCTTTGATCTTGTAACCATTGATGCCAAATCTTATAAGGATCTTGTGAGTAGCTTTGTCAGTATCTTGAAGCAGGTTGCTGAAAGGAGGCTTCCTAAGAGCTATGATTATCATCAGATGCCCGCGCCGTTCATTCAGGTTAAGTTGCTAAAGATATTGGCACTGTTGGGGAGTGGGGATAAGCAAGCTAGTGAGAGCATGTATACTGTTCTTGGTGATATTATCAGGAAGAGCGATTCATCAACTAATATTGGGAATGCCGTTCTGTATGAGTGCATTTGTTGTGTGGCTTCCATACACCCCAATCCCAAGTTGTTAGAATCCGCTGCAGATGTTATTGCAAAGTTCTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTGAGTCCGCAGATAGCAGAACAACACCAACTAGCTGTGATTGACTGCTTAGAGGACCCTGATGATACTCTGAAGCGAAAGACTTTTGAATTGCTATATAAAATGACCAAGTCCTCCAATGTCGAAGTGATCGTTGACCGCATGGTTGACTACATGATCAGCATAAGTGATGACCATTATAAAACCTATATAGCATCTCGTTGTGTGGAACTTGCTGAGCAATTTGCTCCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCCGGAGATCTTGTGAACATTAAGGTGGCACATAATCTAATGAGGTTGATTGCTGAAGGGTTTGGAGAGGATGATGATGCTACAGATAGCCAGTTGAGATCATCTGCTGTTGAATCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCCATGTTTCTTCAGGTCATCTGTTGGGTTCTGGGTGAGTACGGCACAGCTGATGGAAAACATTCTGCTTCATATATCAGTGGAAAGTTATGTGACATTGCAGAAGCATATTCAAATGATGAAACTGTTAAGGCATATGCAATTTCAGCATTAATGAAAATTTATGCTTTTGAAGTAGCAGCTGGGAGGAAAGTGGATATGCTACCTGAGTGTCAATCTTTTATTGAAGAATTATTAGCATCTCACTCAACAGATTTGCAGCAACGTGCTTATGAATTGCAAGCCGTTGTTGGTTTGGATGCACAAGCTGTTCAAGCAATATTGCCACGAGACACAAGATGTGAAGAAATTGAGGTTGATAAGGACCTTTCTTTCCTCAATGGTTATGTAGATCAAGCAATAGAAAAGGGTGCTCAGCCTTACATTGCTGAGGATGAGCGTAATGGGATGGGTAATGTGAGCAACCTCAGAAGCCAAGACCAACATGAATCGATACAGCATGGTCTGAGATTTGAGGCATATGAACTTCCAAAGCCTCCAATGCAATCAAAAGTTGATCCAGTTTCATCAACAGATGTTGTTCCAGTACCTGAGGCATTATCTTATAGGGAGACCCATCCCATATCATCAGTGGGATCGACATCAGAGGCTGGGTCATCAGAGCTTAAGCTACGTCTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCAACTTATTCGACTCCAACATCATCTACCACGAATTCTCCTTCCGAAAAACCTGCAAATGGTGCTAGCCATGTGGATAGTGCAACAGCTTCCTATTCAAAGTCACGTGATAGTCAGAATACAAAAAAGACAGAGATTGATCCAGAAAAGCAGAAGCTTGCTGCTTCATTGTTTGGTGGATCATCACAACCTGAGAGAAGATCATCCACTGGTCATAAGGCTTCAAGATCTAGTGGTGGTGCTGCAGATGGATCTCGCGGATCTAAAGCTGTGGAGAAAACGATTCAACAACCACCGCCTCCAGATTTGCTCGACTTCAGTGATGAACCAACTGTTACTAGTGCCCTTCCTTCCGTTGATCCCTTCAAGCAATTGGAAGGACTTCTTGACTCAAGCATGAGTTCTACAACAAACCATAATGCAGGTACTGCCACTATTGCACCTGATATTATGTCACTCTATGGAGACAGTACTGCAAGTCAGGATAGTTTAGATATTTTTCATGGGTTGTCGACTGAACCTACTGGGGCTACTAGTGGAGAAACAACTGTGACAACTTTGCCGCAATCTGTGAAGGGTCCAAACGCTAAAGATGCCTTGGAGAAGGATGCATTAGTGAGGCAGATGGGGGTGAACCCTACTAGTCAAAATCCCAACTTGTTCAGGGACTTGCTTGGCTAA 2801 0.4531 MEQLKTIGRELTMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLREIETLKRRLLEPDIPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALPLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLRSDNYLVVCAALNAVCKLINDETIPAVLPQVVELLGHSKEAVRKKAVMALHRFYQKSPGAVSHLVSNFRKRLCDNDPGVMGASLCPLFDLVTIDAKSYKDLVSSFVSILKQVAERRLPKSYDYHQMPAPFIQVKLLKILALLGSGDKQASESMYTVLGDIIRKSDSSTNIGNAVLYECICCVASIHPNPKLLESAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMVDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDATDSQLRSSAVESYLRIIGEPKLPSMFLQVICWVLGEYGTADGKHSASYISGKLCDIAEAYSNDETVKAYAISALMKIYAFEVAAGRKVDMLPECQSFIEELLASHSTDLQQRAYELQAVVGLDAQAVQAILPRDTRCEEIEVDKDLSFLNGYVDQAIEKGAQPYIAEDERNGMGNVSNLRSQDQHESIQHGLRFEAYELPKPPMQSKVDPVSSTDVVPVPEALSYRETHPISSVGSTSEAGSSELKLRLDGVQKKWGRPTYSTPTSSTTNSPSEKPANGASHVDSATASYSKSRDSQNTKKTEIDPEKQKLAASLFGGSSQPERRSSTGHKASRSSGGAADGSRGSKAVEKTIQQPPPPDLLDFSDEPTVTSALPSVDPFKQLEGLLDSSMSSTTNHNAGTATIAPDIMSLYGDSTASQDSLDIFHGLSTEPTGATSGETTVTTLPQSVKGPNAKDALEKDALVRQMGVNPTSQNPNLFRDLLG 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00329 957 Gene3D - 12 607 IPR011989 -
Arst5g00329 957 MobiDBLite consensus disorder prediction 701 833 - -
Arst5g00329 957 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 27 826 - -
Arst5g00329 957 MobiDBLite consensus disorder prediction 731 768 - -
Arst5g00329 957 MobiDBLite consensus disorder prediction 903 927 - -
Arst5g00329 957 MobiDBLite consensus disorder prediction 787 807 - -
Arst5g00329 957 PIRSF AP4_epsilon 11 687 IPR017109 GO:0015031|GO:0030124
Arst5g00329 957 PIRSF AP4_epsilon 835 957 IPR017109 GO:0015031|GO:0030124
Arst5g00329 957 PIRSF AP4_epsilon 645 829 IPR017109 GO:0015031|GO:0030124
Arst5g00329 957 MobiDBLite consensus disorder prediction 702 716 - -
Arst5g00329 957 PIRSF AP4_epsilon 11 687 IPR017109 GO:0015031|GO:0030124
Arst5g00329 957 PIRSF AP4_epsilon 835 957 IPR017109 GO:0015031|GO:0030124
Arst5g00329 957 PIRSF AP4_epsilon 645 829 IPR017109 GO:0015031|GO:0030124
Arst5g00329 957 MobiDBLite consensus disorder prediction 903 923 - -
Arst5g00329 957 SUPERFAMILY ARM repeat 39 607 IPR016024 -
Arst5g00329 957 Pfam Adaptin N terminal region 54 592 IPR002553 GO:0006886|GO:0016192|GO:0030117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00329 Arst-Chr5 2790850 2797594 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00329 K12400 - gmx:100819573 1499.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00329 5 2790850 2797594 Arst5g00329 5 2790850 2797594 ECH