Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00319 ATGGGTTTGCCGAGGTTTGGGCGTCCCAAGAATGGTGTTGAACTGAGTCCAAACCTGTATGTGGCAAATTGTGGACCTGCTGTGGGGATCTCCCATGATGACATTGCATCTGTTTTCTGCAAATTTGGTGAGCTCAAAGGGGTTTATGCAGCTGATGAGAGTGGCACACGTGTCATTGTGTCTTTCTCTGAAGAGGGTTCTGCACAATCTGCATTCAAGGCATTAGATGGAACCCCATGTCCTGAACTCGGAGGAAGGTCCTTGCATATTCGTTATTCAGTGATTCAGCCAACTCCAAAGGATGAAGTTAGTGACATGGTTCCAGTATCTATTAATGCATCGGAATTGAGTATTCCAGGACTTTACCTAGTGCACAACTTCATTAGCGCTAAAGAAGAAGAGGAATTACTCCAAGCTGTTGACAGTCGGCCTTGGAACAGTCTTGCCAAAAGAAGGGTTCAACACTATGGTTATGAATTTCGTTACGATATTAGGAATGTTAATACAAGGCATTGCTTAGGTGAGCTTCCATCTTTTGTTTCTCCAATACTTGAAAGAATCTCATCATGTCCAACTTTCAAGAGTGCTGAACATATTGTTTTGGACCAACTTACTGTAAATGAGTATCCTCCTGGGGTGGGCTTGTCCCCCCATATAGATACCCATTCAGCATTCGAAGATTTAATTTTCAGCCTTTCATTATCAGGGCCTTGTATAATGGAGTTCAGAAAATATGAAAATGGTGATTGGCATACTAAAGTTGCCTCAAGTGCTGTTTCAGAAGGAGGAAGTCCGGAAGACGATTCAAATTTTTTAAGGAAGGCTATCTATCTACCCCCTCGATCTTTGCTACTCTTGTCTGGAGAAGCACGTTATGCATGGAACCATTATATTCCACACCACAAGATTGACAAAGTGAACGGCAGAGTCATCAGAAGGGCATCAAGAAGGGTCTCTTTCACATTTCGAAAGGTGTTCATCCTGCTGATGAAATGTGGTTTCACTCCGATATTACATAACAATACGATGGGGTTATTCTGGAAGACCATGATTCTTTATTTTTAG 1065 0.4225 MGLPRFGRPKNGVELSPNLYVANCGPAVGISHDDIASVFCKFGELKGVYAADESGTRVIVSFSEEGSAQSAFKALDGTPCPELGGRSLHIRYSVIQPTPKDEVSDMVPVSINASELSIPGLYLVHNFISAKEEEELLQAVDSRPWNSLAKRRVQHYGYEFRYDIRNVNTRHCLGELPSFVSPILERISSCPTFKSAEHIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRKYENGDWHTKVASSAVSEGGSPEDDSNFLRKAIYLPPRSLLLLSGEARYAWNHYIPHHKIDKVNGRVIRRASRRVSFTFRKVFILLMKCGFTPILHNNTMGLFWKTMILYF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00319 354 Gene3D - 7 107 IPR012677 -
Arst5g00319 354 Gene3D - 111 327 IPR037151 -
Arst5g00319 354 Pfam 2OG-Fe(II) oxygenase superfamily 121 323 IPR027450 -
Arst5g00319 354 FunFam ALKylated DNA repair protein AlkB homolog 114 328 - -
Arst5g00319 354 SUPERFAMILY Clavaminate synthase-like 118 325 - -
Arst5g00319 354 PANTHER OXYGENASE-RELATED 94 325 IPR032857 GO:0070988
Arst5g00319 354 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 326 IPR005123 -
Arst5g00319 354 SMART rrm1_1 18 91 IPR000504 GO:0003723
Arst5g00319 354 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 95 IPR000504 GO:0003723
Arst5g00319 354 SUPERFAMILY RNA-binding domain, RBD 15 99 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00319 Arst-Chr5 2607006 2611859 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00319 K10770 - gmx:100777529 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00319 5 2607006 2611859 Arst5g00319 5 2607006 2611859 ECH