Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00276 ATGCTGGAGGCGCAGCCAGTGTTGTTCAGGAGAAGCCCGTCGAGGAGGCGCATGCTGAGGCCTGGCGTTGGTACCGACGATAGAGGTTGGACTTCTCTTCATGTTTGCGCCCGCAAAGGTGATCTCAAACTGGTAAAAAAACTTCTTGATGAAGGAATGGATGTCAATGTGACTGCATGGGGCCCTAAATCACAAGGCGTGACCCCTCTTCACCTTGCTGCTGAAGGTGGCCACCTTGGAGTGATGGATGAACTGCTGGAACGTGGTGCTGACATTGATGCTAGAACAAAGGGTGCTTGTGGCTGGACACCACTCCATATTGCTGCCAAAGAAAGGAGGAGGGATGCCGTGAAATTCTTGGTTGAGAACGGAGCTTTCTTGCCACCTGATATGAACGACAGCAGATTCAATCCCCCGCTTCATTACTGCCCTGGACTTGAATGGGCCTACGAGGAGTTGAAGCGACTTCGATGTGAGGACTTGTCATCGGGGGAGACATCTTACAGTTCTGAAAACTAA 519 0.5145 MLEAQPVLFRRSPSRRRMLRPGVGTDDRGWTSLHVCARKGDLKLVKKLLDEGMDVNVTAWGPKSQGVTPLHLAAEGGHLGVMDELLERGADIDARTKGACGWTPLHIAAKERRRDAVKFLVENGAFLPPDMNDSRFNPPLHYCPGLEWAYEELKRLRCEDLSSGETSYSSEN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00276 172 Pfam Ankyrin repeats (3 copies) 33 125 IPR002110 GO:0005515
Arst5g00276 172 SUPERFAMILY Ankyrin repeat 26 143 IPR036770 -
Arst5g00276 172 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Arst5g00276 172 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Arst5g00276 172 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Arst5g00276 172 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Arst5g00276 172 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Arst5g00276 172 Gene3D - 22 159 IPR036770 -
Arst5g00276 172 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Arst5g00276 172 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED 25 125 - -
Arst5g00276 172 PRINTS Ankyrin repeat signature 29 44 IPR002110 GO:0005515
Arst5g00276 172 PRINTS Ankyrin repeat signature 81 95 IPR002110 GO:0005515
Arst5g00276 172 SMART ANK_2a 28 57 IPR002110 GO:0005515
Arst5g00276 172 SMART ANK_2a 65 94 IPR002110 GO:0005515
Arst5g00276 172 SMART ANK_2a 100 133 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00276 Arst-Chr5 2426492 2429395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00276 32 150 Acyl Lipid Metabolism Gene Families AT5G53470 33.613 1.99e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00276 - - aprc:113868977 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00276 5 2426492 2429395 Arst5g00276 5 2426492 2429395 ECH