Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00256 ATGGGAGAGTTCAACAGCAATGTTGAGTATGTCACCGTTGTAGATTTACCTTCCCCAAGGAGAACTCACACCATGAAGAAAGTTTCAATTCTCCCTCTTGTATTCCTAATCTTCTATGAGGTTTCAGGTGGTCCCTTTGGTGTTGAGGACACTGTTCATGCAGCAGGTCCACTCTTGGCCCTTCTTGGTTTTGTAGTTTTCCCATTCATATGGAGCATCCCTGAAGCTTTGATCACTGCTGAGATGGGCACAATGTTCCCGGAAAACAGCGGTTATGTCGTTTGGGTCTCGACTGCGCTGGGTCCCTTTTGGGGGTTTCAGCAGGGTTGGATGAAGTGGCTGAGTGGTGTGATAGACAATGCTTTATATCCTGTTCTGTTTCTTGATTATCTGAAATCTGGAGTCCCTGCATTAGGGGGTGGATTACCTAGAATCCTTGCAACTTGGGGTTTGACAATTGTTCTCACTTTCTTGAACTACAGGGGTTTAACAATTGTAGGATATGTTGCTGTTTTCTTAGGGGTTTTCTCGCTCCTCCCTTTTGTGGTTATGGGGTTTTTGTCAATTCCGGACTTGAAACCTTCGAGATGGACTGTGGTAAACACTAAAGATGTTGATTGGAATTTGTATTTGAATACTTTGTTCTGGAATCTCAATTACTGGGATTCTATAAGTACTCTTTCTGGGGAAGTGGAGAATCCGAAGAAAACTCTTCCAAAAGCTTTGTTTTTCGCGTTGATCCTAGTGGTTCTGGGGTATTTCTTCCCACTTCTGATTGGTACGGGCGCTGTTCCCCTTAATCGAGAGCTGTGGACTGATGGTTACTTCTCGGATATTGCTATGATTCTTGGAGGAGCGTGGTTGAGATGGTGGCTTCAGGCTGCTGCCGCGATGTCAAATATGGGAATGTTTGTTGCTGAAATGAGCAGCGACTCTTTCCAGCTTCTAGGGATGGCCGAGAGAGGAATGTTGCCCGAGTTCTTCAGCAAGAGATCTCGTCATGGAACCCCTCTTGTAGGTATACTTTTCTCTGCCTCTGGTGTAATTCTACTGTCATGGATGAGCTTTCAAGAGATCGTAGCGGCAGAAAACTTCCTGTACTGTTTCGGAATGATTTTGGAGTTTATTGCATTCATATTGTTGAAGATCAAGCACCCCAATGCGTCTCGGCCTTACAAGGTGCCAGGAGGAGCAGCCGGGGCGATCCTCATGTGCATCCCTCCGACCGCATTGATCTGTGTCGTGTTGTATTTTTCCACCCTCAAAGTAATGGTTGTAAGCCTCATTGCTGTGTCAATTGGCCTTGTCTTGCAGCCTTGTATCAAATATGTAGAAAAAAAGAGGTGGTTGAAGTTCTCCCATAGTGCTGATCTCCCAGATCTTGAACATGAGGAGAGCACTCACTCTTTGGTGAATTAA 1419 0.4531 MGEFNSNVEYVTVVDLPSPRRTHTMKKVSILPLVFLIFYEVSGGPFGVEDTVHAAGPLLALLGFVVFPFIWSIPEALITAEMGTMFPENSGYVVWVSTALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSGVPALGGGLPRILATWGLTIVLTFLNYRGLTIVGYVAVFLGVFSLLPFVVMGFLSIPDLKPSRWTVVNTKDVDWNLYLNTLFWNLNYWDSISTLSGEVENPKKTLPKALFFALILVVLGYFFPLLIGTGAVPLNRELWTDGYFSDIAMILGGAWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFSKRSRHGTPLVGILFSASGVILLSWMSFQEIVAAENFLYCFGMILEFIAFILLKIKHPNASRPYKVPGGAAGAILMCIPPTALICVVLYFSTLKVMVVSLIAVSIGLVLQPCIKYVEKKRWLKFSHSADLPDLEHEESTHSLVN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00256 472 FunFam Amino acid permease, putative 24 453 - -
Arst5g00256 472 Pfam Amino acid permease 38 407 IPR002293 GO:0016020|GO:0022857|GO:0055085
Arst5g00256 472 Gene3D Amino acid/polyamine transporter I 25 457 - -
Arst5g00256 472 PIRSF AA_transporter 14 469 - -
Arst5g00256 472 PANTHER POLYAMINE TRANSPORTER PUT1 20 465 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00256 Arst-Chr5 2257425 2263569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00256 5 469 Organic Solute Cotransporters AT1G31830 73.561 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00256 - - aip:107642412 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00256 5 2257425 2263569 Arst5g00256 5 2257425 2263569 ECH
Arst5g00256 5 2257425 2263569 Arst1g01240 1 12334897 12336654 PCT