Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00208 ATGAATCGCCACCAGGATCCTAATCCGTTCGAAGAAGAAGTTAATCCTTTCTCGAATGGTGCTGGTGCTCCTGGATCAAAATCACGTATTCCACAAATGTCATCTGAACCAGTGGGCTTTGGCCAAAGACATGATGCTACAGTTGATATTCCTTTGGACGTTACAACTGACTCTAAGAAAAAGGGACAAGAGCTAGCAGCTTGGGAAGCAGATTTGAAAAGGAGAGAGAAGGAAATAAAAAGAAGAGAAGAAGCTGTTGCTAAAGCTGGTGTGCCTGTTGATGATAAGAATTGGCCTCCATTTTTCCCAATCATTCACCATGATATTGCCAATGAGATACCAGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTATGCCTAGTTTTTAATGTAGTTGCTGTGATTGTCTGTTGGATCAGAGGCGGCGGCTCTAAAATTTTTTTCCTTGCGGTTATTTATGCTCTTCTTGGGGTTCCACTTTCATACGTGCTTTGGTACAGGCCCCTCTATCGTGCTATGAGTACGGATAGTGCACTGAAGTTTGGTTGGTTTTTCTTGTTCTACTTGATTCATATTGCATTTTGCATCTTTGCTGCAATTGCGCCTCCTGTTGTTTTTCATGGAAAATCATTAACGGGCATTCTTGCGGCAATCGATGTTTTCTCAGACCATGTATTGGTTGGGATATTCTACTTGGTTGGATTTGGTCTATTTTGCTTGGAGGCTCTTCTAAGCTTGTGGGTGCTTCAGAAAATATACTTGTATTTCCGGGGACATAAGTGA 807 0.4201 MNRHQDPNPFEEEVNPFSNGAGAPGSKSRIPQMSSEPVGFGQRHDATVDIPLDVTTDSKKKGQELAAWEADLKRREKEIKRREEAVAKAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGSKIFFLAVIYALLGVPLSYVLWYRPLYRAMSTDSALKFGWFFLFYLIHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFGLFCLEALLSLWVLQKIYLYFRGHK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00208 268 Coils Coil 65 85 - -
Arst5g00208 268 Pfam SCAMP family 96 266 IPR007273 GO:0015031|GO:0016020
Arst5g00208 268 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 267 IPR007273 GO:0015031|GO:0016020
Arst5g00208 268 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00208 Arst-Chr5 1925060 1930144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00208 1 268 Miscellaneous Gene Families AT1G32050 74.908 6.24e-151 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00208 K19995 - gmx:100806586 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00208 5 1925060 1930144 Arst5g00208 5 1925060 1930144 ECH