Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00194 ATGCAGAAATTGGGAGAGTTCAAGTTACCACATTTCTTCAACTACCCGCCATACTTCACTTTGCAGCCAGTAAGAGACACTAGAGAGAAGCAGGTACAACTGTGGAAGGATCTTATTCTAGATTATTGTAGAACACAAAAGGTATTTGTAATTGGGCTTGAAGAAGAATTTCCTCTGTTTTCGAATCCCGTAATTGGAAGGTCTCTTACTCATGAAGCTAGAGAAGCATTCCTTTCAGCCTTAGTAGCTGATGGACGTGCTGAGTGGATGGATAAAGGACATAGGAAATGTCTTATTCTCTGGCATCGGATTCAAGAGTGGGCAGAAATTTTAGTACAATTTGCAAGAGATAATGGGCTGGAAGACGGTGTTGTGACAATGGAAGAAATAAGGTTTGGGACTGAATCTCAAGGAACAGAGCTTCAAGGGATAGACCGAACTATTCTGAATCGTGCGCTGAAAATATTAGAGCAAAAGGGGAAGCTTGTGGTCTTCAAAGGAACTTCAACTGATGATGAAGGAGTGAAATTTTCTCTATGA 540 0.4093 MQKLGEFKLPHFFNYPPYFTLQPVRDTREKQVQLWKDLILDYCRTQKVFVIGLEEEFPLFSNPVIGRSLTHEAREAFLSALVADGRAEWMDKGHRKCLILWHRIQEWAEILVQFARDNGLEDGVVTMEEIRFGTESQGTELQGIDRTILNRALKILEQKGKLVVFKGTSTDDEGVKFSL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00194 179 Gene3D - 101 178 IPR036388 -
Arst5g00194 179 FunFam vacuolar protein-sorting-associated protein 25 100 178 - -
Arst5g00194 179 SUPERFAMILY "Winged helix" DNA-binding domain 102 177 IPR036390 -
Arst5g00194 179 Pfam ESCRT-II complex subunit 13 145 IPR008570 GO:0000814|GO:0071985
Arst5g00194 179 FunFam Vacuolar protein sorting-associated protein 25 5 100 - -
Arst5g00194 179 SUPERFAMILY "Winged helix" DNA-binding domain 7 107 IPR036390 -
Arst5g00194 179 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 2 178 IPR008570 GO:0000814|GO:0071985
Arst5g00194 179 Gene3D - 4 100 IPR014041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00194 Arst-Chr5 1830898 1834152 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00194 K12189 - gmx:100803388 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00194 5 1830898 1834152 Arst5g00194 5 1830898 1834152 ECH