Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00178 ATGGCATCTAAGTCACCTCGATTCAAACACGGTTCATCAATGGTTAGAAAAATCACCCAACTGAGCAATGATCTTGATCATGATCAAGATCAAGAGAGTGAGAATGGTGGTGGTGGTGTTGCTACCTACACAGTTCACATTCCACTAACCCCTGATAACCAACCAATGGAGATTGCTCTGGAGAGATCGACTTCGAGGCGAGTGGAGGACCAATATGCATCTAGTTCATTGTTCACTGGGGGTTTCAATCAGGTTACAAGGGCTCATTTGAAGGAGAAGATGATTGAGTCTGAGTCAAGCCACCCCCAGATGTCGGGGGTGAAGGGATCGTCCTGCGCGGTCCCTGGCTGTGATGGGAAGGTTATGACCGATGAGAGGGGGTTAGACATACTCCCTTGTGAGTGTGATTACAAGATTTGCAGGGATTGTTATAGGGATGCTTTGAGAACTGGTGAGGGGATTTGCCCTGGCTGCAAGGAACCTTACAAGGAGTTGGATGCAAATGATGGATATAGGGCCGGCCAGCAGCCTGCACTGCCCTTGCCACCCGGTGCTGGAGTGTCGAAGATGGAGAGGAGGTTGTCGTTGATGAAATCGGGGACTTTGACAAGGAGCCAGGCTAATAATGACTTTGATCATGCTCAGTGGTTGTTTGAAACTAAGGGGAGCTATGGCTATGGGAATGCTATGTGGCCGAAAGAGCCCGAAAACGATGCTAGTTCTGTTTCTGAATGGATGGGTGGTGATCCTCATGTGTTCAAGGAAAAGCCATGGAGACCTTTGACCCGGAAATTGACTATCTCTGCTGCAATTCTGAGTCCATATAGGCTAATAATATTTGCTCGGCTAGTGATTCTTGGTTTCTTCTTAGCGTGGAGGGTTCGAAACCCCAATGAAGATGCACTCTGGCTGTGGGGTATGTCTGTTGTTTGTGAAATCTGGTTTGCCTTCTCCTGGCTGCTTGATCAGCTTCCTAAGCTCTTCCCTGTCAACCGGTTCGCGGATCTTGATGTTCTGAAAGAGAAGTTTGAAACTCCCACTCCCAACAATCCTTCTGGCAAGTCTGATCTCCCAGGAATAGATATTTTTGTGTCGACTGCGGATCCTGAAAAAGAACCTCCACTTGTCACAGCAAATACTATTCTTTCCATTCTAGCTGCCGATTATCCGGTAGAGAAACTTGCATGTTATGTCTCTGACGATGGAGGTGCACTTCTAACTTTTGAGGCCATGGCAGAGGCTGCAAGTTTTGCCAACTTGTGGGTTCCTTTTTGCCGAAAGCATGACATTGAACCGAGGAACCCCGACTCATACTTTAGTATGAAGAGAGATCCCTACAAGAACAAAGTTCTCCCTGACTTTGTAAGGGATAGAAGGAGGGTAAAGCGTGAATATGATGAGTTCAAGGTTCGGATCAATGGCCTTCCTGATTCAATCCGCCGGCGTTCTGATGCTTACAATGCCAGAGAAGAGATAAAAGCTATGAAGCTTTGGAGGGAGAATGGACATGATGAACCAATGGAGAATGTGAAAATTCCTAAAGCTACTTGGATGGCAGATGGTACCCACTGGCCTGGCACTTGGACAATTCCAGCATCGGAACATTCTAGGGGCGATCATGCTAGTATCATACAGGTCATGTTAAAACCTCCAAGTGATGAACCACTAACTGGTGTTGCATCAGATGCAAATGCTATGAATTTAACCGAAGTTGATATTCGCCTTCCCATGCTTGTCTATGTTTCTCGAGAAAAAAGACCAGGCTATGATCACAACAAGAAGGCTGGGGCGATGAATGCGCTGGTCCGAGCCTCAGCCATTATGTCAAATGGTCCTTTCATACTTAATCTGGACTGTGACCATTACATATTTAATTCCCAGGCATTGAGAGAAGGTATGTGCTTCATGATGGACCGTGGTGGCGACAGAATCTGCTATGTTCAATTCCCTCAGAGGTTCGAAGGAATAGACCCTTCGGATCGCTATGCCAATCATAACACAGTCTTCTTTGATGTCAATATGCGCGCCCTTGATGGGATTCAAGGTCCTGTATATGTAGGCACAGGTTGCTTATTCAGAAGGACTGCACTCTATGGCTTTGATCCACCTCGGGTGAAAGAAGAGTCTAGTTGCTTCGGCCGCAAGAATAAGAAATCCTCGACCGTTGCCTCACTCCCGGAAACTGGTTCTGTTGAGGATCAGTCATTTGCAAATGGTGGCGCCGACGATGAAGGCCTTGCTCTTATTCCCAAGAGTTTTGGCAACTCAAGTCTCCTTATTGATTCAATCAGGGTGGCCGAGTTCCAAGGTCGACCCCTCGCTGATCATTCGTCCATCAAAAATGGAAGACCACCGGGTGCTCTAACCCTTCCTCGGGATCTTCTGGATGCTGCTACTGTGGCAGAGGCTATCAATGTTATCTCCTGCTGGTATGAAGACAAGACTGAATGGGGCCTTCGAATCGGGTGGATTTATGGGTCTGTTACTGAGGATGTTGTGACAGGTTATAGAATGCACAATAGGGGATGGAGGTCCATATATTGTGTGACTAAGAGGGATGCCTTCCGTGGCACTGCTCCGATCAACCTGACCGACCGGCTCCACCAGGTTCTTCGTTGGGCTACCGGCTCTGTCGAAATATTCTTTTCTCGAAACAATGCTCTTTTGGCCAGCCTCAAATTGAAGTTCCTACAGAGAATAGCTTACCTCAATGTCGGAATCTATCCTCCAAGAACATTCCTAGTGTACCTCTTGGGCATCACCGTGACCCTTGTCTTACTCGCCATCCTCGAGGTTAAGTGGTCCGGTATTGAACTCGAAGAGTGGTGGAGGAATGAGCAATTCTGGCTGATAGGAGGCACTAGTGCCCACCTTGCTGCAGTTCTCCAAGGCCTACTAAAGGTGATGGCTGGCATTGAAATTTCATTCACTTTGACATCAAAGTCAGCCGGGGACGATGAAAACGACGAATTTGCTGACCTCTATATCATCAAATGGACATCTCTGATGATACCACCAATCACCATCATGATGGTAAACTTGATAGCAATAGCTGTGGCAGTTAGCAGAACTATATACAGCGAAGATCGAAAATGGAGCAGCTTGCTGGGTGGTGTGTTCTTCAGCTTATGGGTGCTGGCTCATCTCTATCCCTTTGCAAAAGGGCTCATGGGAAGAAGGGGTAGAACACCAACCATTGTGTTTGTATGGTCAGGGCTTATATCAATCACCATTTCTCTTCTTTGGGTTGCCATTGATCCTCCTTCAGGTAGCTCTGATATTGGAGGATCTTTTCAATTCCCTTGA 3306 0.471 MASKSPRFKHGSSMVRKITQLSNDLDHDQDQESENGGGGVATYTVHIPLTPDNQPMEIALERSTSRRVEDQYASSSLFTGGFNQVTRAHLKEKMIESESSHPQMSGVKGSSCAVPGCDGKVMTDERGLDILPCECDYKICRDCYRDALRTGEGICPGCKEPYKELDANDGYRAGQQPALPLPPGAGVSKMERRLSLMKSGTLTRSQANNDFDHAQWLFETKGSYGYGNAMWPKEPENDASSVSEWMGGDPHVFKEKPWRPLTRKLTISAAILSPYRLIIFARLVILGFFLAWRVRNPNEDALWLWGMSVVCEIWFAFSWLLDQLPKLFPVNRFADLDVLKEKFETPTPNNPSGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPDSYFSMKRDPYKNKVLPDFVRDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIKAMKLWRENGHDEPMENVKIPKATWMADGTHWPGTWTIPASEHSRGDHASIIQVMLKPPSDEPLTGVASDANAMNLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIFNSQALREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRVKEESSCFGRKNKKSSTVASLPETGSVEDQSFANGGADDEGLALIPKSFGNSSLLIDSIRVAEFQGRPLADHSSIKNGRPPGALTLPRDLLDAATVAEAINVISCWYEDKTEWGLRIGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASLKLKFLQRIAYLNVGIYPPSXTFLVYLLGITVTLVLLAILEVKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSAGDDENDEFADLYIIKWTSLMIPPITIMMVNLIAIAVAVSRTIYSEDRKWSSLLGGVFFSLWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSDIGGSFQFP 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00178 1102 Pfam Cellulose synthase 360 916 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst5g00178 1102 Pfam Cellulose synthase 360 916 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst5g00178 1102 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 176 IPR013083 -
Arst5g00178 1102 Pfam RING/Ubox like zinc-binding domain 114 163 - -
Arst5g00178 1102 SUPERFAMILY Nucleotide-diphospho-sugar transferases 375 908 IPR029044 -
Arst5g00178 1102 SUPERFAMILY RING/U-box 96 169 - -
Arst5g00178 1102 MobiDBLite consensus disorder prediction 1 48 - -
Arst5g00178 1102 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 555 708 IPR029044 -
Arst5g00178 1102 FunFam cellulose synthase-like protein D3 565 702 - -
Arst5g00178 1102 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 259 1072 - -
Arst5g00178 1102 FunFam Cellulose synthase-like protein D3 95 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00178 Arst-Chr5 1618661 1622714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00178 30 1102 Glycosyltransferase AT3G03050 74.595 0.0 1692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00178 K20924 - gmx:100813900 1876.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00178 5 1618661 1622714 Arst5g00178 5 1618661 1622714 ECH