Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00170 ATGGAAGGAAAAACTGCAAAGGCATTGGATAGAGTTGCACTCCACATGAAGCGGAAGCGGGCTACCCGATATGATTCACATCGTAACGGGGCTTCTCTGCCACTGTTACGTCAGTGGTCATCATGCAAGGTTGCCAAACGGATGAGATTGGGCCAACATCAAAGCAAGTTGACAAACGGTGGAACTCATATTGGACGGTTCTTACGTGGGTATTATTTGAACTATAAGAAGACTGGACGGCCCGAACGTTTGATGTTCTATAAGAATGGTGACTGGTTGGACTTTCCTAAGGATGTTCTTGACTTGGTTAAGAAAGATCTTGAGGTCAAGAAGGCAACAGTGGAGGTACAGTCAAATGGCCGTCATCTTGTGCTAGATTTTTTGCACATGTATCAGATGGACTTGAAGACTGGTTTGCAACAACCTCTAGCCTGGATTGATGAACATGGATGCTGCTTTTTCCCTGAAATCTTTGCGGCTTCGGATGGACTTTATGATATTTCCAAACAGGAGGGTGTAACTAGTAATGTCGCAAATGAAATAAAACTTAAGTTGGAATTAGCTATAAATGAATTGGATGGCTCCAAAATGTTGGAGTGTAGTGGAGAATCTAATGCTTTGGTTAAGAGCATTCAGATTGATGCCACTGAAAAAAATGATGTAGAAATTGAAGATAGCATTAATAATATGGACTGTCAAAATGTTGGTGAAGCCATTGAACAAAATCGGGACTTAGGATTAGGTGATTATACTGATTCTGTATATGGAAAGTTGGATTTAGATACTGTACAGACGATGTTTCTTAAAGGGATGGTTAGTTCTGGTAATGATACTGGCATAGTTGAGATTTATCGCTGCTCGAGTGCAACAACACAAGTGCGATTGGAGCTATTCCAGAAGCAAGCTGAAATTACGAAGAAAGCTCATGGGGATGCTAATGTTCGATATGCTTGGCTTGCTCTTTCAAAAAATGAACTATCTACAATGATGCAGTATGGACTTGGCTATTGTGGACTATCTTTATCTAAATGCAAATATGCTGTTGGTGTCCATCTTGCTGCTGCTACGTGCCCTTATGCAAGTGCACGTTATTGCGATATTGACGAAAATGGGAATAGCCACTTGGTCTTATGCCGTGTAATAATGGGAAACATGGAGCTTCTTCCCGCGGGTGGTCGACAGTTCCGTGCCAGTAGTGGTGAATATGATAATGGGGTTGATGACATTCTACATCCAACATACTATATTGTATGGAATATGAATATGAACTCCCACATCTACCCAGAATTCGTTGTTAGTTTCAAGGTGGCTACAAATATTCAAGGCAACCATGGTAACCCTGGGGTTAATGTAGGTGCAGTTGGTCAATGTGACCCTTCACAACCAGAGTCTTCTACAGTAGATAATGGAAAAGTTGTGCCTGCTGCTCGCCTAGTTCCGAAATCCCCATGGATGCCTTTTCCAGCCCTTTTTGCTGCTATCAAAAGCTCAGTGCCTCCCAGCACCATGGATGCCATCAAAGGAGATTATGAACGATTCCAGAAAAAGCAAATATCCCGTGATGTTTTTATTCAGAGGTTGAGGTTCATAGTTGGAGATAATCTCTTGAGAACTACAGTACAAAAACTTCAATACAAGATACCGCGGAGTGGTGAATCGAAGGTACCAGCCAAGGAGTAA 1680 0.4196 MEGKTAKALDRVALHMKRKRATRYDSHRNGASLPLLRQWSSCKVAKRMRLGQHQSKLTNGGTHIGRFLRGYYLNYKKTGRPERLMFYKNGDWLDFPKDVLDLVKKDLEVKKATVEVQSNGRHLVLDFLHMYQMDLKTGLQQPLAWIDEHGCCFFPEIFAASDGLYDISKQEGVTSNVANEIKLKLELAINELDGSKMLECSGESNALVKSIQIDATEKNDVEIEDSINNMDCQNVGEAIEQNRDLGLGDYTDSVYGKLDLDTVQTMFLKGMVSSGNDTGIVEIYRCSSATTQVRLELFQKQAEITKKAHGDANVRYAWLALSKNELSTMMQYGLGYCGLSLSKCKYAVGVHLAAATCPYASARYCDIDENGNSHLVLCRVIMGNMELLPAGGRQFRASSGEYDNGVDDILHPTYYIVWNMNMNSHIYPEFVVSFKVATNIQGNHGNPGVNVGAVGQCDPSQPESSTVDNGKVVPAARLVPKSPWMPFPALFAAIKSSVPPSTMDAIKGDYERFQKKQISRDVFIQRLRFIVGDNLLRTTVQKLQYKIPRSGESKVPAKE 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00170 559 Pfam RCD1-SRO-TAF4 (RST) plant domain 480 544 IPR022003 -
Arst5g00170 559 SUPERFAMILY ADP-ribosylation 262 436 - -
Arst5g00170 559 ProSiteProfiles PARP catalytic domain profile. 237 460 IPR012317 GO:0003950
Arst5g00170 559 ProSiteProfiles RST domain profile. 478 549 IPR022003 -
Arst5g00170 559 Gene3D - 256 436 - -
Arst5g00170 559 ProSiteProfiles WWE domain profile. 70 145 IPR004170 -
Arst5g00170 559 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 55 546 IPR044964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00170 Arst-Chr5 1523043 1528638 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00170 - - gmx:100797549 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00170 5 1523043 1528638 Arst5g00170 5 1523043 1528638 ECH