Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00159 ATGTCGTCGATAAAGACTGTTAAGGTCAGTAACGTTTCCTTGGGAGCTACTGATCGAGACATTAAGGAGTTCTTTTCTTTTTCTGGTGACATTGAATATGTTGAGCTTCGGAGTCATGATGAACGGTCCCAAATTGCTTATGTTACCTTCAAGGATGCACAGGGAGCTGAGACTGCAGTACTGCTATCGGGAGCAACTATAGTTGATTTGTCGGTTACAATAACTCCAGATCCAGATTACAAACTTCCACCTGCTGCCTTTGCATCAGCTCCAAAAGAAAGTCAAGCTCCCGGTGGTGCTGATTCTGCTTTAAGGAAGGCAGAGGATGTGGTTTCAAGCATGCTGGCCAAGGGCTTTATCTTAGGGAAGGATGCTGTCAACAAAGCAAAGACTTTTGATGAGAAGCACCAATTAACCTCATCTGCCTCGGCAAAAGTTGCATCTATTGATCAGAAAATTGGGTTCAGTGAGAAAATAACTGCTGGTGCTTCAGCTGTAAGTGGTAGAGTTCGAGAGGTTGACCAAAAGTTCCAGGTTTCAGAGAAGACCAAATCGGCATTTGCAGCTGCAGAGCAAAAAGTCAGTACTGCTGGTTCTGCCTTGATGAAGAATCGCTATATACTTACTGGTGCCTCCTGGGTAACAGGTGCTTTCAACAGGGTTTCTAAGGCGGCTGAGGATGTAGGACAGAAGACGAAAGAGAAAGTAGTTAGCGCAGAAGAGCAACAGAAGCGACAAGTGGAAGATCAGTATGCGCAAGTCCTTTCTGAGTCCCCAAAAGCAGGTTCGGCAGCAAGTGAACATCACTCTTCCAAGCCTGCCCCTGCTCAGGGTTTGATCCTTTGA 846 0.4586 MSSIKTVKVSNVSLGATDRDIKEFFSFSGDIEYVELRSHDERSQIAYVTFKDAQGAETAVLLSGATIVDLSVTITPDPDYKLPPAAFASAPKESQAPGGADSALRKAEDVVSSMLAKGFILGKDAVNKAKTFDEKHQLTSSASAKVASIDQKIGFSEKITAGASAVSGRVREVDQKFQVSEKTKSAFAAAEQKVSTAGSALMKNRYILTGASWVTGAFNRVSKAAEDVGQKTKEKVVSAEEQQKRQVEDQYAQVLSESPKAGSAASEHHSSKPAPAQGLIL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00159 281 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 243 - -
Arst5g00159 281 FunFam RNA recognition motif-containing protein 1 75 - -
Arst5g00159 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 67 IPR000504 GO:0003723
Arst5g00159 281 Gene3D - 2 75 IPR012677 -
Arst5g00159 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 5 77 IPR000504 GO:0003723
Arst5g00159 281 SUPERFAMILY RNA-binding domain, RBD 3 77 IPR035979 GO:0003676
Arst5g00159 281 SMART rrm1_1 6 75 IPR000504 GO:0003723
Arst5g00159 281 MobiDBLite consensus disorder prediction 236 281 - -
Arst5g00159 281 Coils Coil 237 257 - -
Arst5g00159 281 MobiDBLite consensus disorder prediction 248 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00159 Arst-Chr5 1394159 1397435 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00159 - - gmx:100809613 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00159 5 1394159 1397435 Arst5g00159 5 1394159 1397435 ECH