Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00072 ATGGCGACACCAGAGACGGAGCATCCAAAGAAGGCTTATGGATGGGCAGCTAGGGACCCTTCTGGGGTTTTATCCCCTTTCAACTTTTCCAGAAGGGAAACTGGAGAGCAAGATGTGGCATTCAAAGTGATGTACTGTGGAATATGTCACTCGGATCTTCACATGTTAAAGAACGAATGGGGCAATACCACTTTTCCTATAGTACCCGGGCATGAGATTGCTGGAGTAGTGACAGAGGTAGGAAGTAAGGTACAAAATTTCAAAGTTGGAGACAAAGTGGGAGTGGGAGTGTTGGTTGGATCCTGCAACTCATGCCAAGGCTGTGCTGCAAATCTTGAAAATTTCTGCCCGCAAATGATCCTAACATACAGTGCCAAGAACAAGGACGGCACCATCACCTACGGAGGCTACTCTGACTCAATGGTAGTCGATGAACGCTTCGCCATTCGCATCCCGGACAACCTTCCACTGGATGTGGCCGCTCCGTTGCTTTGTGCCGGGATCACGGTGTATAGCCCTCTCAGGTATTTCGGACTTGACAAGCCTGGTTTGCACGTCGGTGTGGTTGGTCTTGGTGGATTAGGCCATGTGGCCGTTAAGTTTGCCAAAGCTTTTGGTGCTAAAGTAACTGTCATTAGTACTTCCCCTAACAAACAAAAGGAAGCTATTGAACGTTTAGGAGCCGATTCGTTTCTCTTAAGTAAAGACCAAGATCAGATGAAGGCTGCAATGTATAGCTTGGATGGTATTATTGACTCAGTTTCTGCAGTGCATCCTTTGGCTCCATTGCTGGCTCTATTGAAGCCTAATGGAAAACTTGTGATGGTTGGTTTACCCGAAAAGCCTCTGGAGTTGCCAATGTTTTCTCTTTGTACGGGAAGAAAGATGATAGCTGGTAGTTGTATTGGAGGGTTGAAGGAGACACAAGAAATGATTGATTTTGCTGCTAAACATAACGTGAAGCCTGAGATTGAAGTTATTGCAATGGATTATGTAAACACAGCAATGGAGCGCCTCGCAAAAGCAGATGTCAAGTATCGATTTGTTATTGATATCGGAAACACTCTCAATGCCACAACCTCTTAA 1086 0.4567 MATPETEHPKKAYGWAARDPSGVLSPFNFSRRETGEQDVAFKVMYCGICHSDLHMLKNEWGNTTFPIVPGHEIAGVVTEVGSKVQNFKVGDKVGVGVLVGSCNSCQGCAANLENFCPQMILTYSAKNKDGTITYGGYSDSMVVDERFAIRIPDNLPLDVAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKQKEAIERLGADSFLLSKDQDQMKAAMYSLDGIIDSVSAVHPLAPLLALLKPNGKLVMVGLPEKPLELPMFSLCTGRKMIAGSCIGGLKETQEMIDFAAKHNVKPEIEVIAMDYVNTAMERLAKADVKYRFVIDIGNTLNATTS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00072 361 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Arst5g00072 361 FunFam Uncharacterized protein 15 165 - -
Arst5g00072 361 Gene3D - 166 322 - -
Arst5g00072 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Arst5g00072 361 Pfam Zinc-binding dehydrogenase 193 316 IPR013149 -
Arst5g00072 361 FunFam Putative cinnamyl alcohol dehydrogenase 6 323 352 - -
Arst5g00072 361 SMART PKS_ER_names_mod 22 350 IPR020843 GO:0016491
Arst5g00072 361 CDD CAD1 14 351 IPR047109 GO:0016616
Arst5g00072 361 FunFam Cinnamyl alcohol dehydrogenase 166 322 - -
Arst5g00072 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Arst5g00072 361 PANTHER ALDEHYDE REDUCTASE 4 355 IPR047109 GO:0016616
Arst5g00072 361 Gene3D - 15 352 - -
Arst5g00072 361 SUPERFAMILY GroES-like 18 183 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00072 Arst-Chr5 593089 595173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00072 10 357 Monolignol Biosynthesis Gene Families AT4G37990 70.690 1.09e-169 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00072 K23232 - gmx:100809071 554.673