Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00008 ATGCCAAACAAGGAGAATTCAGCGCTAGTGGAAGCAAAGGTTCCTTTGCTAAACAGTAACCAATCTTTAAGAGTTCATGAAAATGGAGATGATCAAAACCATGAAGACGATGTCCTGTCTCAAAGAATATGGATTGAATCAAAGAAGCTATGGCATATAGTAGGCCCTGCAATCTTCAGCCGCATAACTTCCTACATGATTTTGGTGATCACACAAGCCTTCGCAGGCCACCTTGGCGATCTTGAACTCGCAGCTTTCTCCATTTCCAACAATGTCATCGTCGGCTTCGACTTCGGCCTCTTGCTGGGTATGGCGAGTGCGTTGGAAACTCTGTGCGGGCAGGCGTATGGCGCCAAGAAACACTACATGCTAGGCGTATACATGCAGCGATCATGGATAGTTCTCTTCATATGCTGCATCTTCCTGGTTCCTCTCTACGTGTTTGCGACGCCGGTCTTAAGAGTTTTGGGTCAGCCGGAGGAATTGGCTGTCCTGGCCGGCGAGGTGGCGCTATGGATGATTCCTCTTCACTTCAGCTTCGCGTTCCAGTTCCCACTGCAGAGGTTTCTTCAGAGCCAGCTGAAGACAGCCGTGATAGCATGGGTGTCGTTGGTGTCGCTGCTGGTGCACATCGCCATTAGCTGGTTCTTTGTGTCGCAGCTGAAGTTCGGGGTGGTTGGAACAACCGCCACGGTGAATTTCTCGTGGTGGGTCATGACTTTGGGGTTGTTTGGGTACACAGTTTCCGGTGGCTGCCCAAACACTTGGACTGGTTTCTCGCTTGAAGCTTTTGCTGGCCTTTGGGACTTTGTTAAACTCTCTGCTTCTTCTGGTCTCATGCTCTGCTTGGAGAATTGGTATTACAGAATTCTGATACTGATGACAGGAAATCTACCGAACGCAGAGATTGCTGTGGATGCTTTGTCCATATGCATGACAATCAATGGCTTGGAAATGATGATTCCTCTGGCATTCTTTGCTGCTACAGGAGTGAGGGTTGCAAACGAACTTGGAGCTGGGAATGGTAAAGGAGCAAAATTTGCTACAAAAGTATCTGTGATGACATCAATTGCAATAGGACTGTTCTTCTGGATGTTGATTTTGATATTTCATGACAAATTCGGATACATATTCTCTACTAGCAAACCTGTCCTTGATGAAGTTAACAAGCTTTCTCTTCTGTTAGCCTTCACTATTCTCCTCAACAGTGTTCAGCCAGTTCTTTCAGGTGTGGCAGTAGGATCAGGGTGGCAATCATATGTTGCATACATAAACTTGGGCTGCTACTATCTCATTGGGGTTCCTCTTGGATTGTTGATGGGCTGGGTCTTCAATCAAGGAGTTATGGGAGTTTGGGCCGGAATGATTTTTGGTGGAACAGCAACTCAAACATTAATATTAGGCCTTATAACCATTCGGTGTGACTGGGACAAAGAGGCTGAGCGAGCCAAATTGCATTTGAGAAAGTGGGACAATCCAAAAGAACTGAACTAA 1494 0.4659 MPNKENSALVEAKVPLLNSNQSLRVHENGDDQNHEDDVLSQRIWIESKKLWHIVGPAIFSRITSYMILVITQAFAGHLGDLELAAFSISNNVIVGFDFGLLLGMASALETLCGQAYGAKKHYMLGVYMQRSWIVLFICCIFLVPLYVFATPVLRVLGQPEELAVLAGEVALWMIPLHFSFAFQFPLQRFLQSQLKTAVIAWVSLVSLLVHIAISWFFVSQLKFGVVGTTATVNFSWWVMTLGLFGYTVSGGCPNTWTGFSLEAFAGLWDFVKLSASSGLMLCLENWYYRILILMTGNLPNAEIAVDALSICMTINGLEMMIPLAFFAATGVRVANELGAGNGKGAKFATKVSVMTSIAIGLFFWMLILIFHDKFGYIFSTSKPVLDEVNKLSLLLAFTILLNSVQPVLSGVAVGSGWQSYVAYINLGCYYLIGVPLGLLMGWVFNQGVMGVWAGMIFGGTATQTLILGLITIRCDWDKEAERAKLHLRKWDNPKELN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00008 497 CDD MATE_eukaryotic 46 482 IPR045069 GO:0042910|GO:1990961
Arst5g00008 497 PANTHER MULTIDRUG RESISTANCE PROTEIN 39 476 - -
Arst5g00008 497 NCBIfam MATE family efflux transporter 56 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g00008 497 Pfam MatE 278 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Arst5g00008 497 Pfam MatE 56 215 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00008 Arst-Chr5 74583 82108 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00008 K03327 - gmx:100796652 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00008 5 74583 82108 Arst5g00008 5 74583 82108 ECH