Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03200 ATGCAGGTGTTCGTTAATTTGATCACAAATTCTTGTGCTAAGAATATGGAGAAGAAATCATCATCATCAACAAAGTTTGATGAGATTTCTGAGTTAGGATTTCAACCTCCTCCTCCTTCTCCTTCTATGGAGGATCATTCGGCAACCGATGCATGGACATATTCAGAGCCAGAGGCATCAAACTTATCAGATTCAGTTGATGAAAGCAGTTATGCCAGTGACCTTTCGCCTTCTCGGCCGACGGCTGCGAAAGCAGATGCTAAACAAGGTGTTCTTTCAAGGCTAGGATTGAAGTTGCGCAAGAATTCGGTCGATGTTAAGCTCAATGAGAGTGATCTTATGGATTCAGGTGAGCTTGAAGTAATGAAGGAAAGATTTTCAAAGCTTCTGTTGGGAGAAGACATGTCTGGTGGTGGAAAAGGAGTTTGCACTGCAGTTACAATTTCAAATGCCATTACCAATCTCTATGCAACTGTATTTGGACAAAGTTTGAAGTTGGAGCCACTGAAGCCTGAGAAGAAAGCAATGTGGAAAAGAGAAATGAAGGTTCTTTTATCAGTGTGTGATTATATAGTAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGAACAATCGTTGAGATGATGAAGAGTAGACCAAGATCAGACATATATATCAACCTCCCTGCTCTACAGAAGCTTGACACAATGCTCATAGAAATATTAGACACTTTCCATGATACTGAATTTTGGTATGTAGATAACATTCCGGCGAATTCACCACGCACGCGCGCAACCTCTTTTCGGAGGATTGTTCAGCGAAAAGACGAGAAATGGTGGCTTCCGGTGCCTTGTGTTCTCCCCGGTGGCCTATCTGAAAAATCAAGGAAGCACTTAGTAGAAAAAAGAGATTGTGCTAACCAAATTCATAAAGCAGCCATGGCAATAAACAACAATGTTCTTGCTGAGATTGATATCCCAGAAACCTACATTGATAATCTTCCTAAGAATGGAAGAGCAAATATGGGAGACACAATTTACCACTACATGTCTGCTGCAGAGAAATTCTCAGCTGATCAACTTCTTGACTACTTGAAGATAAGTTCTGAGCATGAAGCACTTGAGCTGGCCGACAGGGTCGAGTCTTCGATGTACTCGTGGCGCCGGAAAGCTTGCCTGAGCCATTCCAAATCATCCTGGAGCAAAGTGAAGGAACTCATGGCCGACGGCGACCGGAAGGACAAGAATTACACCTTAGCTGAGAGAGCAGAGACTTTGTTGTTCTGCCTGAAGCAAAGATATCCTGAACTGTCACAAACTTCTCTTGACACATGCAAGATTCAGTATAACAAGGATGTTGGAAAAGCAATACTGGAGAGTTATTCAAGAGTACTAGAAGGCCTAGCATTCAACATTGTTGCTTGGGTTGAAGATGTTCTCTATGTAGATAAATCAATGAAGAACAGAGAGGTCTAG 1458 0.4211 MQVFVNLITNSCAKNMEKKSSSSTKFDEISELGFQPPPPSPSMEDHSATDAWTYSEPEASNLSDSVDESSYASDLSPSRPTAAKADAKQGVLSRLGLKLRKNSVDVKLNESDLMDSGELEVMKERFSKLLLGEDMSGGGKGVCTAVTISNAITNLYATVFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIVEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDTFHDTEFWYVDNIPANSPRTRATSFRRIVQRKDEKWWLPVPCVLPGGLSEKSRKHLVEKRDCANQIHKAAMAINNNVLAEIDIPETYIDNLPKNGRANMGDTIYHYMSAAEKFSADQLLDYLKISSEHEALELADRVESSMYSWRRKACLSHSKSSWSKVKELMADGDRKDKNYTLAERAETLLFCLKQRYPELSQTSLDTCKIQYNKDVGKAILESYSRVLEGLAFNIVAWVEDVLYVDKSMKNREV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03200 485 FunFam Rop guanine nucleotide exchange factor 14 111 350 - -
Arst4g03200 485 Gene3D PRONE domain, subdomain 1 111 354 - -
Arst4g03200 485 MobiDBLite consensus disorder prediction 16 87 - -
Arst4g03200 485 FunFam Rop guanine nucleotide exchange factor 14 352 485 - -
Arst4g03200 485 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 118 481 IPR005512 GO:0005085
Arst4g03200 485 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 47 484 IPR038937 GO:0005085
Arst4g03200 485 MobiDBLite consensus disorder prediction 46 77 - -
Arst4g03200 485 ProSiteProfiles PRONE domain profile. 109 485 IPR005512 GO:0005085
Arst4g03200 485 Gene3D PRONE domain, subdomain 1 376 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03200 Arst-Chr4 109146371 109150492 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03200 - - adu:107485793 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03200 4 109146371 109150492 Arst4g03200 4 109146371 109150492 ECH
Arst4g03200 4 109146371 109150492 Arst2g00060 2 433650 437371 PCT