Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03178 ATGACCAAGGAAGAACAAGTGTTTGAGTTCCTCGGGTGTGTTCCTCTGCTACAGAGACTTCCTAGCTCCTCCGTCAGGAAGATTTCTCAGCTTGTGATTGTTAAGCACTATGAGCCCGGAGATTATGTTGTTCGTGAGGGGGAACCTGCAGATGGGCTTTACTTCATATTTGAAGGAGAGGCTGAAGTTATTGGATCGGATAGAACTGATGATGAAAATCATCCAGAATTTCTATTAAAAAGATATGACTATTTTGGTTATGGTCTAGCAAATGCTGTTCATCAAGCTGATGTCATAGCTCTGACTAAGTTGTCATGTTTATTGCTGCTTCATGAGCACTCAGCACTGCTACAGCCAAATTCTATTTGGAGTGAAGAAAAATCTGTTGATACATGCTCGCTAGTGGAGCATATATTGCATTTGGAGCCTATAGAGGTAGATATCTTCCGAGGAATCACCCCTCCAAAGGCTCCGAAATTCGGGAAGGTGTTTGGTGGACAGACGGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGCCTATTTTCTTCTTGTTGGGGATTTTAACATGCCAATTATATATCAAGTTCATAGACTCCGTGAAGGGAAGAGCTTTGCCACAAGGAGAGTGGATGCAATTCAAAAGGGAAATATCATTTTCACATTGATGGCTTCATTTCAAAAAGAGGAAATTGGGTTTGAACACCAGGAAGTGACTATGCCATCTGTCCCTAATCCAGATGAGCTTCTTTCAATGGAAGAGTTACGGGAACAACGTCTTACTGACCCACGTCTCCCAAGAACTTACCGTAACAAGGTTGCTACATCCGAGTTCATTCCCTGGCCCATAGAGATAAGGTTCTGTGAGCCAAAAACTAAAACAACTCAGACCAAATCTCCTCCCAGCTTGAGATACTGGTTTAGAGCAAAGGGGAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTGGCATATGCTTCTGATCTGATATTTCTTCAAGTTAGCTTAAACCCTCATCGTCGAAAGGGCTTCAAGGCCCGGGCTGTTAGCCTAGACCACTCGATGTGGTTTCATCGCCCTCTAAGAGCTGATGACTGGGTTCTATTTGTGATCTTTTCTCCTAGTACCTCCAATGCGCGTGGCTATGTCTCAGGCCAAATGTTCAATCAGAAGGGAGAAGTAAGGGATTTTGTTCCAAATTCAGCCATCAAATCTAAGTTGTGA 1260 0.4341 MTKEEQVFEFLGCVPLLQRLPSSSVRKISQLVIVKHYEPGDYVVREGEPADGLYFIFEGEAEVIGSDRTDDENHPEFLLKRYDYFGYGLANAVHQADVIALTKLSCLLLLHEHSALLQPNSIWSEEKSVDTCSLVEHILHLEPIEVDIFRGITPPKAPKFGKVFGGQTVGQALAAASKSVDCLKVVHSLHAYFLLVGDFNMPIIYQVHRLREGKSFATRRVDAIQKGNIIFTLMASFQKEEIGFEHQEVTMPSVPNPDELLSMEELREQRLTDPRLPRTYRNKVATSEFIPWPIEIRFCEPKTKTTQTKSPPSLRYWFRAKGKLSDDQALHRCVVAYASDLIFLQVSLNPHRRKGFKARAVSLDHSMWFHRPLRADDWVLFVIFSPSTSNARGYVSGQMFNQKGEVRDFVPNSAIKSKL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03178 419 Gene3D - 130 407 IPR042171 -
Arst4g03178 419 FunFam Acyl-CoA thioesterase II 2 125 - -
Arst4g03178 419 NCBIfam acyl-CoA thioesterase II 139 406 IPR003703 GO:0006637|GO:0047617
Arst4g03178 419 Gene3D Jelly Rolls 1 126 IPR014710 -
Arst4g03178 419 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 405 IPR029069 -
Arst4g03178 419 SUPERFAMILY cAMP-binding domain-like 6 109 IPR018490 -
Arst4g03178 419 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Arst4g03178 419 CDD Thioesterase_II_repeat2 147 239 - -
Arst4g03178 419 SMART cnmp_10 16 135 IPR000595 -
Arst4g03178 419 PANTHER ACYL-COA THIOESTERASE 120 405 IPR003703 GO:0006637|GO:0047617
Arst4g03178 419 Pfam Thioesterase-like superfamily 154 405 - -
Arst4g03178 419 CDD Thioesterase_II_repeat1 314 405 - -
Arst4g03178 419 FunFam Acyl-CoA thioesterase II 130 416 - -
Arst4g03178 419 CDD CAP_ED 16 100 IPR000595 -
Arst4g03178 419 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 241 IPR029069 -
Arst4g03178 419 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 43 59 IPR018488 -
Arst4g03178 419 Pfam Cyclic nucleotide-binding domain 35 109 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03178 Arst-Chr4 108340104 108345995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03178 5 406 Acyl Lipid Metabolism Gene Families AT1G01710 70.149 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03178 K01068 - gmx:100805018 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03178 4 108340104 108345995 Arst4g03178 4 108340104 108345995 ECH
Arst4g03178 4 108340104 108345995 Arst2g00052 2 378380 381951 PCT