Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02947 ATGACTGCGTCTGAGAACACACTAACTTTATTAAACAAACACGGAAAGTGGAAAGCAGGAAATTGTCTTTGCAACTACTGCCATTTCTTCCACTTTCATCAACATTTATTTCACTCACACGCTTCAAACGACGTCGTTTTGCTTAACATTCTCATGGCCCTCTTGAAGACCTCCACCACTCTCTCCTTCAGAGCAACCGCTTTTCCGCTCCATGGCCATACCACCAACACCAGGAAGTTGCATTGGAAGCCTACTCAAGCAGCTTTGACATCCAGTTTCCACCTTCCTATGCGTAGCTTTGAGGCTAAGAACAGGACTTCCACAGATGACGTAAAACGTCTGAGATTGATAACTGCCATTAAGACACCATACCTACCCGATGGTCGCTTTGATCTTGAAGCATATGATACCTTAGTAAATTTGCAGATTGAAAATGGAGTTGAAGGTGTCATTGTTGGTGGTACAACTGGAGAAGGCCAATTAATGAGCTGGGATGAACACATAATGCTTATTGGGCACACAGTCAACTGTTTCGGAGTGAAAATCAAGGTTATAGGAAACACCGGAAGCAACTCAACAAGGGAAGCAATCCATGCCACAGAGCAGGGTTTTGCTGTTGGGATGCACGCTGCCCTTCACATAAACCCTTACTACGGCAAAACTTCCTTGAATGGTTTGATTTCTCATTTCAATACCGTGCTTCCGATGGGCCCTACCATCATATACAATGTGCCTTCAAGGACCAGTCAAGACATTCCTCCACAGGTGATTCAAACCTTAGCACAGAGTGCGAGTTTAGCCGGTGTCAAGGAATGTATGGGAAATGACAGGATCAAACAATATACAGATAATGGCATTGTTGTGTGGAGCGGGAATGATGACCAATGCCATGATGCTAGATGGGGTTACGGAGCGACAGGAGTGATATCTGTCGCAAGCAACCTGGTTCCCGGTTTAATGCGAGAACTCATAATTGGTGGTGAGAATCCGGCGCTGAATTCTAAGCTCATGCCTCTTGTTGAATGGCTTTTTTGCGAGCCAAACCCCATCGGTTTGAACACAGCTCTTGCTCAACTCGGAGTTGCTCGGCCGGTTTTCAGGTTACCATATGTACCTCTCCCTTTGAAGAAGCGGATGGAATTTGTCAATTTGGTGAAGGGAATCGGTCGAGAGCACTTTATTGGAGACAAAGATGTTCAGGTTCTTGATGATAATGACTTTATCTTAATTGGTCGTCATTAA 1242 0.4485 MTASENTLTLLNKHGKWKAGNCLCNYCHFFHFHQHLFHSHASNDVVLLNILMALLKTSTTLSFRATAFPLHGHTTNTRKLHWKPTQAALTSSFHLPMRSFEAKNRTSTDDVKRLRLITAIKTPYLPDGRFDLEAYDTLVNLQIENGVEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGVKIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLNGLISHFNTVLPMGPTIIYNVPSRTSQDIPPQVIQTLAQSASLAGVKECMGNDRIKQYTDNGIVVWSGNDDQCHDARWGYGATGVISVASNLVPGLMRELIIGGENPALNSKLMPLVEWLFCEPNPIGLNTALAQLGVARPVFRLPYVPLPLKKRMEFVNLVKGIGREHFIGDKDVQVLDDNDFILIGRH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02947 413 SUPERFAMILY Aldolase 116 387 - -
Arst4g02947 413 CDD DHDPS 115 385 IPR005263 GO:0008840|GO:0009089
Arst4g02947 413 ProSitePatterns Dihydrodipicolinate synthase signature 2. 242 272 IPR020625 GO:0016829
Arst4g02947 413 Gene3D Aldolase class I 107 413 IPR013785 -
Arst4g02947 413 PANTHER DIHYDRODIPICOLINATE SYNTHASE 97 397 IPR002220 GO:0016829
Arst4g02947 413 NCBIfam 4-hydroxy-tetrahydrodipicolinate synthase 116 380 IPR005263 GO:0008840|GO:0009089
Arst4g02947 413 PRINTS Dihydrodipicolinate synthase signature 237 254 IPR002220 GO:0016829
Arst4g02947 413 PRINTS Dihydrodipicolinate synthase signature 214 230 IPR002220 GO:0016829
Arst4g02947 413 PRINTS Dihydrodipicolinate synthase signature 146 167 IPR002220 GO:0016829
Arst4g02947 413 PRINTS Dihydrodipicolinate synthase signature 182 200 IPR002220 GO:0016829
Arst4g02947 413 SMART DHDPS_2 113 389 IPR002220 GO:0016829
Arst4g02947 413 ProSitePatterns Dihydrodipicolinate synthase signature 1. 149 166 IPR020624 GO:0016829
Arst4g02947 413 Pfam Dihydrodipicolinate synthetase family 115 386 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02947 Arst-Chr4 104627574 104630545 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02947 K01714 - gmx:100788930 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02947 4 104627574 104630545 Arst4g02947 4 104627574 104630545 ECH
Arst4g02947 4 104627574 104630545 Arst2g02962 2 87213446 87216612 PCT