Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02518 ATGCAGACTCATGGTGTACGGGTCGGGCAAGAGAGTGCTAAGAAGGCAATGAGTTTCATTGAGGCTATAACAGTTATAGCAAAGGAAGAAGGCATTAAAGGTTACTGGAAGGGAAACCTCCCCCAGGTGATTCGGGTTGTTCCTTATAGTGCTGTCCAGCTTTTTGCATATGAAATTTACAAGAAAATATTCAGGGGACAGAATGGTGAGCTCTCTGTTGTGGCAAGACTTACAGCAGGTGCTTTTGCTGGCATGACATCCACTTTTATAACTTACCCATTAGATGTCCTGAGATTGCGATTAGCTGTTGAACCTGGTTATCGAACTATGTCACAGGTTGCCCTGGGCATGATAAGGGAGGAAGGAATTGCATCTTTCTACAGGGGCCTTGGGCCTTCGCTTATTGCAATAGCTCCGTATATTGCAGCAAACTTTTGTGTTTTTGACCTATTGAAGAAGTCATTGCCCGAGAAATATCAAAAGAGAACCGAAACATCAATACTCACTGCCTTGCTTTCGGCCTCGCTTGCCACACTTACATGCTATCCTTTGGACACTGTGCGAAGACAAATGCAATTGAAGGGTACGCCTTATACAACGGTATTAGAGGCCCTTTCAGGTATTGTGGCACGAGATGGAGTTGTCGGCTTATATCGGGGATTTCTGCCTAATGCTCTAAAAACCCTACCAAACAGCAGCATCAAGCTTACCACATATGACCTTGTTAAGCGCCTAATTGCTGCTAGTGAGAAAGAGTTTCAAACAATTACAGAGGAAAACCGCAACAAACAACAGAACATCAACAGTCAAGGATAA 816 0.44 MQTHGVRVGQESAKKAMSFIEAITVIAKEEGIKGYWKGNLPQVIRVVPYSAVQLFAYEIYKKIFRGQNGELSVVARLTAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSQVALGMIREEGIASFYRGLGPSLIAIAPYIAANFCVFDLLKKSLPEKYQKRTETSILTALLSASLATLTCYPLDTVRRQMQLKGTPYTTVLEALSGIVARDGVVGLYRGFLPNALKTLPNSSIKLTTYDLVKRLIAASEKEFQTITEENRNKQQNINSQG 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02518 271 SUPERFAMILY Mitochondrial carrier 1 242 IPR023395 -
Arst4g02518 271 Pfam Mitochondrial carrier protein 70 157 IPR018108 -
Arst4g02518 271 Pfam Mitochondrial carrier protein 166 247 IPR018108 -
Arst4g02518 271 Pfam Mitochondrial carrier protein 10 66 IPR018108 -
Arst4g02518 271 PRINTS Mitochondrial carrier protein signature 86 104 IPR002067 GO:0055085
Arst4g02518 271 PRINTS Mitochondrial carrier protein signature 170 192 IPR002067 GO:0055085
Arst4g02518 271 PRINTS Mitochondrial carrier protein signature 38 58 IPR002067 GO:0055085
Arst4g02518 271 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Arst4g02518 271 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 245 IPR018108 -
Arst4g02518 271 ProSiteProfiles Solute carrier (Solcar) repeat profile. 71 154 IPR018108 -
Arst4g02518 271 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 63 IPR018108 -
Arst4g02518 271 FunFam Envelope ADP,ATP carrier protein 1 251 - -
Arst4g02518 271 Coils Coil 246 266 - -
Arst4g02518 271 PANTHER SOLUTE CARRIER FAMILY 25 12 246 - -
Arst4g02518 271 Gene3D Mitochondrial carrier domain 1 246 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02518 Arst-Chr4 91636895 91640393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02518 90 266 Organic Solute Cotransporters AT3G51870 25.532 1.87e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02518 K14684 - gmx:100778912 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02518 4 91636895 91640393 Arst4g02518 4 91636895 91640393 ECH
Arst4g02518 4 91636895 91640393 Arst2g02542 2 80783564 80786961 PCT
Arst2g02343 2 76312853 76317689 Arst4g02518 4 91636895 91640393 PCT