Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02130 ATGGAACGCAAGAAAACGCTGACGATGAATTGGGCCGGCCTCAGCGACGACAACGAGGACGAGCACTTCTTCGAGATCACTAACCGCCTCAACACGATTTGTCACCGTGACTTGGCTTCTTCCTCCGACGACGATGAGGAATTCGAAGACCCCCGCACATCGTTCTCCGCAACCATGTCTACCACACAATATCGAACATTCTCACGAATGTTTACAAGAACAGCCTCCATTCAACCCACCCCCAATTACGACATTTGGATGGCTGCACCAGGATCCATCACAGAAAGACGAAGAAGATTACTTGGAAGCATGGGATTGGATGAAAACAAAGTCTCATTAAAGGTCACCAGTTTCGCTCTTGATCGTGCTGTCACCAAGAAGCTCGATAAAATGAATAAGAAGGCTCCTATCCCTATTCCTGTTCCGCCTCGTTCTACAACAAGGGCCCCACGTTTGTTAGAAGAAGTGGCTGTTGGTTCCTCTCCTTCCCTTCCTTCCATTTCAGAAGAGCAAGAAACGAAGCATGCCCCTGTTTTGTTCTGCTTGGTGCGATCACGTTCCGAAGGGGATATTGAGATGATTTCCATGGCGAAAGCAAGGAAAGAGGAGTTCATTGGGAAGGTTTCGAAGCAGCGATTAACAAGAACCTCGTCGGAGATAGTAATGCCTCGTGCTAAGATGGTCCCCGCCGCAATGGTCCTGAAGGATCCTGCGGAGGTGAAGGCAAGGGTGGCCAATCATAACCGGAAGTCTTCGACGGCGGCGGGGGCAGGAGTGGGGGCTTTCTTTCTGATAAAGAATTTGGATACCGGGAAGGAATTTATTGTGAAGGAATATAGCGAAGACGGAATGTGGAATAAACTAAGTGATTTGCAGACGGGGAAGCAGTTAACGATGGATGAGTTTGAGAAAACTGTGGGGCATTCGAAAATTGTCAAGGAAATGATGAAGCGAGCCAAGGTGGGGAAGAAGGAAGGTATAGGAAAGATATTATCATCGAGTTCGATTTCAAAAAGTTTGAAATTAAGCAAGAAAAAGGGAGCTTCGTTCATAAAGAATGTGAAAGGTGCTGCAAGTAAAAGTTTTGGCGGGGAGAAGGAACTTAAAGAAGCTGGAGGAATTCTATCACAACCAGTGTCGGCAGAATCGAAAGCAACACAACAAGGGAAGAATGATTGGGTGAAAGTGCGACAAATTGGAAAGTCAGAGAAGGAGCTTTCGGCATTACATTTGTGTCAAGAGTTTCAAGCACATGAAGGAGGGATTTCGATCATAAAGTTTAGTTTGGATGGAAGGTTTTTGGCAAGCGGCGGAGAAGATAAAGTAATTCATGTGTGGGAAGTACAAGAATGCGGTCTTACGCCGTCTATACCAGGGCAAACAGAGGCTCCACCAGACAAGAAGAAAAGAGGGAAAGGGAGCTCAATTCCAGATTGGGTACAAGTCCCTGAGTTTGTTTTTAACCTTTCGGAGAAGCCATATTGCTCTTTTAACGGTCATTTGGATGAAGTCTTGGATTTGTCCTGGTCCAAATCATTACTTCTATCCTCTTCGATGGACAAAACAGTGAGATTATGGGACCTAGAAACTAAAGCATGCTTGAAGTTCTTTGCACACAACGACTACGTAACTTGCATACAGTTCCATCCTATAGACGAAAATTATTATATTAGTGGCTGCCTTGATGCTAAGGTTAGAGTATGGAACATCCCTGCACGTCAGGTTGTGGATTGGACAGACATCGAAGAAATGGTTACTGCAATTACTTACACCCCGGATGGCCATGGTGCTATAGTTGGTACGATTAAAGGGGATTGCCGCACTTTCAAAGTACAAGATCACCAGTTAAGTGACCCAGGGACAATTAACTTCACACAGAAGAAGAAATCTCAGATTAAAAAGATTACTGGTTTCCAATTTGCCCCAAGGAACACATCAGAAATTCTTATTACTTCAGGCGATTCTAGGATAAGAATAGTGGACGGTTCAAAAGTCCTTCACAAGTTCAGAGGTTTTCGAAATGGAAATAGCCAAATTGCAGCTTCATTTAGTCCAAATGGAAGATACATAATCAGTGCAAGTGAGGATTCTCAAGTATTTGTTTGGAAATATGAAGAGCCTCGTAATGCAAACGCTGCAAAAGCTAAGACTATAACCGTGACCCAATCTTATGAACAGTTCCAATGTAAAGATGTAACAGTAGCAATACCATGGCCTTGTACAATTAAGAGTGATCCATCACAAGCGCCAGTGATTAACAACGCAAAAAAGAACACAAAACGCGGCGGGGATGATAATAAGAAAGCGTTGCCTCCTCTTCCAAAGAAAAACAATAACCACGGAAATAACGGAACTGATGGTAACGTAGCCTCGGCCGCACCGGATCACGACTCTTCAGCATATTCAAACGCAGAATCAGGCGTTGGAGATTCATCTAATAAAGTTGAGGCCACAGTAGAAGGTGATGGCACTTCTCAAGAAGAAGGTGAGGCAGTTTCTAGGGATAATTCAGGATTAGGTGATTCAGTTGCATCAAGTTCTGCACCAAATGGTCATGGCGATTCATCTGCTACAACTGCTGCTACTGCATCTTCAAATTTTTTGTTAAGTGATGTTAGCAACAATAACCCTGCTACAATGAATCCTTCAGCATGGGGCTTGGTGATTGTGACAGCTGGCTTTGAAGGTGAAATACGGTGTTACCAAAACTTTGGGTTGCCAAAAAAATTGGGGCTTCAAGCCAATCTTTTCGGAGGCCCTACATAA 2766 0.4418 MERKKTLTMNWAGLSDDNEDEHFFEITNRLNTICHRDLASSSDDDEEFEDPRTSFSATMSTTQYRTFSRMFTRTASIQPTPNYDIWMAAPGSITERRRRLLGSMGLDENKVSLKVTSFALDRAVTKKLDKMNKKAPIPIPVPPRSTTRAPRLLEEVAVGSSPSLPSISEEQETKHAPVLFCLVRSRSEGDIEMISMAKARKEEFIGKVSKQRLTRTSSEIVMPRAKMVPAAMVLKDPAEVKARVANHNRKSSTAAGAGVGAFFLIKNLDTGKEFIVKEYSEDGMWNKLSDLQTGKQLTMDEFEKTVGHSKIVKEMMKRAKVGKKEGIGKILSSSSISKSLKLSKKKGASFIKNVKGAASKSFGGEKELKEAGGILSQPVSAESKATQQGKNDWVKVRQIGKSEKELSALHLCQEFQAHEGGISIIKFSLDGRFLASGGEDKVIHVWEVQECGLTPSIPGQTEAPPDKKKRGKGSSIPDWVQVPEFVFNLSEKPYCSFNGHLDEVLDLSWSKSLLLSSSMDKTVRLWDLETKACLKFFAHNDYVTCIQFHPIDENYYISGCLDAKVRVWNIPARQVVDWTDIEEMVTAITYTPDGHGAIVGTIKGDCRTFKVQDHQLSDPGTINFTQKKKSQIKKITGFQFAPRNTSEILITSGDSRIRIVDGSKVLHKFRGFRNGNSQIAASFSPNGRYIISASEDSQVFVWKYEEPRNANAAKAKTITVTQSYEQFQCKDVTVAIPWPCTIKSDPSQAPVINNAKKNTKRGGDDNKKALPPLPKKNNNHGNNGTDGNVASAAPDHDSSAYSNAESGVGDSSNKVEATVEGDGTSQEEGEAVSRDNSGLGDSVASSSAPNGHGDSSATTAATASSNFLLSDVSNNNPATMNPSAWGLVIVTAGFEGEIRCYQNFGLPKKLGLQANLFGGPT 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02130 921 MobiDBLite consensus disorder prediction 743 859 - -
Arst4g02130 921 SMART WD40_4 571 610 IPR001680 GO:0005515
Arst4g02130 921 SMART WD40_4 490 527 IPR001680 GO:0005515
Arst4g02130 921 SMART WD40_4 530 569 IPR001680 GO:0005515
Arst4g02130 921 SMART WD40_4 662 703 IPR001680 GO:0005515
Arst4g02130 921 SMART WD40_4 625 661 IPR001680 GO:0005515
Arst4g02130 921 SMART WD40_4 408 447 IPR001680 GO:0005515
Arst4g02130 921 PRINTS G protein beta WD-40 repeat signature 434 448 IPR020472 -
Arst4g02130 921 PRINTS G protein beta WD-40 repeat signature 514 528 IPR020472 -
Arst4g02130 921 PRINTS G protein beta WD-40 repeat signature 556 570 IPR020472 -
Arst4g02130 921 MobiDBLite consensus disorder prediction 795 820 - -
Arst4g02130 921 Pfam WD domain, G-beta repeat 533 569 IPR001680 GO:0005515
Arst4g02130 921 Pfam WD domain, G-beta repeat 493 527 IPR001680 GO:0005515
Arst4g02130 921 Pfam WD domain, G-beta repeat 665 703 IPR001680 GO:0005515
Arst4g02130 921 Pfam WD domain, G-beta repeat 413 446 IPR001680 GO:0005515
Arst4g02130 921 ProSiteProfiles Trp-Asp (WD) repeats profile. 415 449 IPR001680 GO:0005515
Arst4g02130 921 MobiDBLite consensus disorder prediction 838 859 - -
Arst4g02130 921 PANTHER WD REPEAT DOMAIN 44 17 907 IPR040324 -
Arst4g02130 921 MobiDBLite consensus disorder prediction 456 475 - -
Arst4g02130 921 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 497 530 - -
Arst4g02130 921 ProSiteProfiles Trp-Asp (WD) repeats profile. 497 536 IPR001680 GO:0005515
Arst4g02130 921 SUPERFAMILY WD40 repeat-like 409 708 IPR036322 GO:0005515
Arst4g02130 921 ProSitePatterns Trp-Asp (WD) repeats signature. 434 448 IPR019775 -
Arst4g02130 921 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 415 449 - -
Arst4g02130 921 Gene3D - 399 736 IPR015943 GO:0005515
Arst4g02130 921 ProSiteProfiles Trp-Asp (WD) repeats profile. 682 712 IPR001680 GO:0005515
Arst4g02130 921 ProSitePatterns Trp-Asp (WD) repeats signature. 514 528 IPR019775 -
Arst4g02130 921 ProSiteProfiles Trp-Asp (WD) repeats profile. 536 570 IPR001680 GO:0005515
Arst4g02130 921 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 536 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02130 Arst-Chr4 67704421 67708951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02130 415 778 Miscellaneous Gene Families AT5G08390 24.147 2.20e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02130 K20241 - gmx:100793299 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02130 4 67704421 67708951 Arst4g02130 4 67704421 67708951 ECH
Arst4g02130 4 67704421 67708951 Arst2g02231 2 72939875 72946129 PCT