Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01738 ATGGGAACACGCTTCAGACAGGCCGTTGGAGCTATCAAGGACTCTACCACGGTTGGCCTTGCCAAAGTTAATAGTGATTACAAGGAATTGGATGTTGCAATCGTGAAAGCTACCAATCACGTAGAATATCCTCCTAAAGAACGTCACATGCGCACAATATTGCATGCAACATCAGCAAGTCAACCAAGAGCAGATGTGGCATACTGCATTCACAAACTTTCCAAAAGGCTTTACAAGACAAAAAACTGGATAGTTGCTATAAAGACATTGATAGTGATGCATAGGTTATTGAGAGAGGGTGATCCTACTTTCAGAGAAGAGCTCCTAAACTACACACGCAGGGGACACTTTCTCCAAATATCCAATTTCAAAGATGACACCACTCCTCAAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACTTTTTTTACAAGAAAGACTTGAATGCTTTAGAACACTCAAATACGACATTGAAACAGAGCGTTTCGTAAAATCACCAACTTCTTCAGCTAAACCACTTACAAGAACTCGGTCTTTGGGTGCTGTAGAACTGTTGGAGCAGTTACCTGCATTGCAGCAACTTCTGCAACGCCTTATAGGTTGCCAGCCTGAAGGATGCGCTTATGGAAATTATCTTGTACAATATGCATTAGCCCTGGTATTGAAAGAGAGCTTCAAAATATATTGTTCATTGAATGATGGAATCATCAATCTTGTGGATGTGTTCTTTGATATGGAAAGACATAACGCAGTGAGGGCTCTGAAAATTTATAAAAGAGCAACAATGCAGGCTGAGCATCTTGCTCAGTTTTATGAATACTGCAAAGGGTTGGAGATTGCAAGGAATTTCCAATTTCCATGTCTAAGACAGCCACCCCCCTCTTTCCTTGCAACAATGGAAGAATACATTGGAGAAGCACCACAAACTAGCTCTGTTCATCAAAGACTGGAATATCGTGAAGCTGATCTATCACCTTCTAGAGAAGATCCTCCAGAAACCGACGAGCCTGAAGAGCCTCAAGAAACTGAAGGAGAAGAAGAGAATGAGGAAGAACCAGTTGTCAACGGAGAGCCAAATCCTGTGGAAGTGGAAGAGGCTGCTCCGCTGATATCGAATAATTGGATCGATGATGACTTGCTGGGTCTGCGTGAAATAAATCCTCAAGCTGTTGAACTTGAAGAAAGAAATGCTTTGGCCCTTGCAATTGTACAACCTGGTGGAAATAATTCAAACAATCTTGCTTTGAACAACATTGGTGACACTATTGGTTGGGAACTAGCACTGGTTACAGCACAAAGCAACCATACTAGCCAAGCGCCAGATCAAAATATGGCTGGTGGGTTTGACAAGTTATTACTAGATAGTTTATATGAAGATGAGAATGCAAGAAGACAACTTCAGCTCCAAAATGCAGGTTATGGATATGGTGGAAATGGAATGGCCATACAAAACCCATTTGAAAATGATAATGATCCATTTGCAGTGTCCAACAACATAGCACCCCCAACCAGTGTTCAATTGGCATTGCAACAACAACAACAACAAATGCTGTTCCAACAACAACAGAACAATAACATGATGATGACGCCTTACCAGCAGCAACCATATTACAATCCATTTGGAGACCCTTTACCAGTGCCTAACTATGCATATGGTTCTACACCAGCACAGGGAAATTATAATTTAATGTAG 1698 0.4158 MGTRFRQAVGAIKDSTTVGLAKVNSDYKELDVAIVKATNHVEYPPKERHMRTILHATSASQPRADVAYCIHKLSKRLYKTKNWIVAIKTLIVMHRLLREGDPTFREELLNYTRRGHFLQISNFKDDTTPQAWDCSAWVRTYALFLQERLECFRTLKYDIETERFVKSPTSSAKPLTRTRSLGAVELLEQLPALQQLLQRLIGCQPEGCAYGNYLVQYALALVLKESFKIYCSLNDGIINLVDVFFDMERHNAVRALKIYKRATMQAEHLAQFYEYCKGLEIARNFQFPCLRQPPPSFLATMEEYIGEAPQTSSVHQRLEYREADLSPSREDPPETDEPEEPQETEGEEENEEEPVVNGEPNPVEVEEAAPLISNNWIDDDLLGLREINPQAVELEERNALALAIVQPGGNNSNNLALNNIGDTIGWELALVTAQSNHTSQAPDQNMAGGFDKLLLDSLYEDENARRQLQLQNAGYGYGGNGMAIQNPFENDNDPFAVSNNIAPPTSVQLALQQQQQQMLFQQQQNNNMMMTPYQQQPYYNPFGDPLPVPNYAYGSTPAQGNYNLM 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01738 565 MobiDBLite consensus disorder prediction 317 332 - -
Arst4g01738 565 MobiDBLite consensus disorder prediction 333 355 - -
Arst4g01738 565 CDD ANTH_N 30 152 - -
Arst4g01738 565 Pfam ANTH domain 29 305 IPR011417 GO:0005543
Arst4g01738 565 SUPERFAMILY ENTH/VHS domain 29 160 IPR008942 -
Arst4g01738 565 FunFam Clathrin assembly protein AP180 4 159 - -
Arst4g01738 565 Gene3D - 3 159 IPR008942 -
Arst4g01738 565 SMART enth_2 28 159 IPR013809 -
Arst4g01738 565 MobiDBLite consensus disorder prediction 308 361 - -
Arst4g01738 565 ProSiteProfiles ENTH domain profile. 22 159 IPR013809 -
Arst4g01738 565 Gene3D ANTH domain 173 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Arst4g01738 565 FunFam Putative clathrin assembly protein 171 319 - -
Arst4g01738 565 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 521 IPR045192 GO:0048268|GO:0072583
Arst4g01738 565 SUPERFAMILY GAT-like domain 177 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01738 Arst-Chr4 29155297 29162272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01738 K20044 - gmx:100783084 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01738 4 29155297 29162272 Arst4g01738 4 29155297 29162272 ECH
Arst1g02803 1 89874662 89878303 Arst4g01738 4 29155297 29162272 PCT