Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01714 ATGAACATGTTCTACACAAGAAGACCATTCTCCTCCTCTTCTTCTTCTTGCTCCTCAAAGAACCATTCACTCCAAACGTTACTGAAGCGTGGATTCACACCAACCCTGAAATCCATCAACATATTCCTCCTCTCCCTCCTCCGCCACCGCAAGTTCAACCTCATCATCCACCTCTTCACCTCTGCCACACTCATCCCCACTAACCCTACCACCCACTCCATCCTCACATGGGCACTCCTCCATTCTAGAAGCTTCCAAGATGCCGAGAATCTCATCTTAACTCACTTCACCCATTCCCATCCTCGCATCTGGGACACACTCATCCGTACCCACCATGACCCTGAAAGGGCACTCTTTCTTCTACGCTATTGCCTCCAAAACGGTGCCGTTTTGCCCTCTCCTCTCACTTTCTCTTCTCTTATTCACAGGCTCTCTTCTCAGGGGGACCTAGGCATGGCAATGGAGGCGCTGGAGATCATGACAGATCATAGGGTAAGGTACCCTTTTGATGATTTTGTTTGTAGCTCCGTGATTTCTGGGTTTTGTAGGATTGGGAAGCCTGAACTTGCGTTAGGGTTTTATGACAATGCTGTGGGTTCTGGGGCACTGTTGAGGCCCGGCTTGGTTACTTTAACTGCAATTGTTGGTGCACTTGTTAGGTTGGGGAGGCTTGATGAGGTTTGTGGTTTGGTTAGGAGGATGGAGGAGGATGGGATTGGTTTGGATGTTGTTTTGTATAGTGTTTGGGTTTGTGGGTATGTTAAAGGGAATGACTTGGTGGAGGTTTTTCGAAAGATGAGGGAAATGGTGGTGGTGAAGGGTATCGATCATGATCATGTGAGTTATACTATACTCATTGATGGGTTTTCTAAGTTAGGCGATGTGGAGAAGTCATTTGGGATCTTGGCTAAGATGATAAAGGAAGGGAAGAGACCCAATAAGGTCACTTACACTGCAATAATATCTGCTTATTGTAAGAAGGGTAAAGTTGAGGAAGCACGTGGTGTTTTTGACAGGATAGGTGAGTTGGGAATTGAGTTGGATGAGTTTGTGTATGCAGTTTTGATTGATGGATATTGTTGGATTGGAGATTTTGGTAGTGTCTTTAAGCTATTTGTTGAAATGGAGAAAAGAGGGGTTAGTCCTAGTGTTGTTACGTATAATACCATAATAAATGGTTTGTGCAAGTTCGGGAGGACGTCTGAGGCGGATGAGTTATCAAAAGATGTGGCTGCAGATGTGATTACGTACAGCACGTTGTTGCACGGTTATACCGAAGAAGAGAACACTCCGGGGATTTTGCAGACAAAGAGGCGACTAGAAGAAGCTGGAATCGCCATGGATATCATAATGTGGCCGGAAATGGGTCTGGTTCCGAATTCCGTTACTTATTGCACAATGATTGATCAGTATTGCAAGGTAGGTAGAATTGACGAGGCACTTGTGGTATTTGACGACTTCAGAAAAACATCATTCTCTTCACCTGTATGCTACACTAGTATTATTCATGGCCTCTGCAAGAAGGGTATGGTAGAAATGGCCATTGAGGCATTAGTCGAACTCAATGATAAAGGACTGGAGTTAAGTAGATATACATTTAGGATGTTAATGAGGACAATTCTCACTGAAAAGGGTGCAAAAGAGGTTTTAGATTTAGTTTACACAATGGAAGGATTGGGCCAAGACTTATATGAGTCAGTATGTAATGATGCGATCTTTTTATTATGCAGAAGAGGATTTCTTGAGGATGCATATCGCTTGTGCTTGATGATGAGAAAGACAGGTTTATACGTTACAAGAAATTCTTATTATTCTGTTTTGAGAAGCTATCTTAGTAACAGGAATAGGGAGCACATGCTGCCCCTATTGAATATCTTTCTAAAAGAATATGGCCTAGTTGATCCAATGATGCGAAGGATACTAGCATGCTACCTATGTTTAAAAGATATCCATAGTCCCCTTCAATTTATGGGAAAAACAATCTCTCTTCCTGTCTCCATCCTCAGGATTCTGATAAAGGAAGGTAGAGCTTTAGATGCATATAAGCTTGTGGTAAAGACTCAAGATAGTTTACAAGTCATGTATGCTGATTATGCCATTCTGATTGATGCCTTATGCAAGGGAGGATATCTCAATAAAGCATTGGATCTTTGTGCCTTCGTTGAAAAGAAAGGGATCACTTTGGACATAGTTGTATATAATTCTATAATAAATGGATTGTGCCATGAGGGACGTCTTATTGAAGCATTTCGGCTATTTGATTCATTGGAGAAACTTAATTTGATACCATCTGAAATAACTTATGCCACATTAATTTATGCACTAAGTAGGGAGGGATATCTGGTAGATGCCGAGCATGTTTTCAGTAAAATGGTTCTGAAGGGCTTTCAACCAAAAACACAAGTTTATAATTCACTACTTGAGGGTATTTCAAAGTTTGGTCAATTAGAGAATGCGCTCGAGCTTCTAAACGATATGGAGACAAAATATATTGAGCCTGACAGCTTGACGGTTAGTGCTGTCATAAATTGCCATTGCCAAAAGGGCAACATGGAAGGAGCACTTCAATTCTATTATAAGTTCAAGAGGAAGGATGTATCACCTGATTTTTTTGGGTTCTTGTACTTGATAAGAGGATTATGTTCAAAGGGACGGATGGAAGAAGCTAGGAGTGTCTTGAGAGAAATGCTCAAATCGAAGAATATTGAAGAGATAATTAACATAGTTAACAATGAGGTTGATAATGAGTCAATAGGTGGCTTTCTTGCCATTTTGTGTGAGCAAGGAAGTATTCAAGAAGCCCTTGCAGTTCTCAATGAAATTGCAAGCACGCTTTATCCTGTTCTAAGGTTATCTACATATAATCAAGGAGCTCATGCACAGAGGAACATTTCTGAGCTGAACGCTGGTTTACAATCTTCAAGGCGTCTATCCTCCTCTTGTAGAACTGGTTTGGATTTTGGATCTTGTGATGGTAGCGATGAAAGTGATCTTACAATAAATAATGATAGTCATGTGACAAGGTCCCGGCCACTCAATTTCGACTTCTATTATTCCGTGATTGCCACACATTGTGCCAAAGGGGAGCTACAGAAAGCTAATCAAGTAGCCAAGGGAATGCTTTCCCACCTAAGTCGAGGAGCTGAACATAAGAAAGAAGAGAGAAAATGA 3171 0.415 MNMFYTRRPFSSSSSSCSSKNHSLQTLLKRGFTPTLKSINIFLLSLLRHRKFNLIIHLFTSATLIPTNPTTHSILTWALLHSRSFQDAENLILTHFTHSHPRIWDTLIRTHHDPERALFLLRYCLQNGAVLPSPLTFSSLIHRLSSQGDLGMAMEALEIMTDHRVRYPFDDFVCSSVISGFCRIGKPELALGFYDNAVGSGALLRPGLVTLTAIVGALVRLGRLDEVCGLVRRMEEDGIGLDVVLYSVWVCGYVKGNDLVEVFRKMREMVVVKGIDHDHVSYTILIDGFSKLGDVEKSFGILAKMIKEGKRPNKVTYTAIISAYCKKGKVEEARGVFDRIGELGIELDEFVYAVLIDGYCWIGDFGSVFKLFVEMEKRGVSPSVVTYNTIINGLCKFGRTSEADELSKDVAADVITYSTLLHGYTEEENTPGILQTKRRLEEAGIAMDIIMWPEMGLVPNSVTYCTMIDQYCKVGRIDEALVVFDDFRKTSFSSPVCYTSIIHGLCKKGMVEMAIEALVELNDKGLELSRYTFRMLMRTILTEKGAKEVLDLVYTMEGLGQDLYESVCNDAIFLLCRRGFLEDAYRLCLMMRKTGLYVTRNSYYSVLRSYLSNRNREHMLPLLNIFLKEYGLVDPMMRRILACYLCLKDIHSPLQFMGKTISLPVSILRILIKEGRALDAYKLVVKTQDSLQVMYADYAILIDALCKGGYLNKALDLCAFVEKKGITLDIVVYNSIINGLCHEGRLIEAFRLFDSLEKLNLIPSEITYATLIYALSREGYLVDAEHVFSKMVLKGFQPKTQVYNSLLEGISKFGQLENALELLNDMETKYIEPDSLTVSAVINCHCQKGNMEGALQFYYKFKRKDVSPDFFGFLYLIRGLCSKGRMEEARSVLREMLKSKNIEEIINIVNNEVDNESIGGFLAILCEQGSIQEALAVLNEIASTLYPVLRLSTYNQGAHAQRNISELNAGLQSSRRLSSSCRTGLDFGSCDGSDESDLTINNDSHVTRSRPLNFDFYYSVIATHCAKGELQKANQVAKGMLSHLSRGAEHKKEERK 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01714 1056 PANTHER ATPASE EXPRESSION PROTEIN 3 451 839 - -
Arst4g01714 1056 Gene3D Tetratricopeptide repeat domain 548 649 IPR011990 GO:0005515
Arst4g01714 1056 Gene3D Tetratricopeptide repeat domain 224 342 IPR011990 GO:0005515
Arst4g01714 1056 Pfam PPR repeat family 348 396 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat family 729 776 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat family 798 847 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat family 496 538 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 834 868 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 460 494 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 348 382 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 764 798 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 312 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat 136 163 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat 698 726 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat 209 239 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat 173 196 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 313 347 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 209 242 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 731 764 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 837 869 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 315 349 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 351 384 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 876 900 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 496 528 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 280 313 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 385 406 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 462 492 IPR002885 -
Arst4g01714 1056 NCBIfam pentatricopeptide repeat 766 798 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 170 204 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 729 763 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat 865 896 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat 309 339 IPR002885 -
Arst4g01714 1056 Pfam PPR repeat 455 485 IPR002885 -
Arst4g01714 1056 Gene3D Tetratricopeptide repeat domain 104 203 IPR011990 GO:0005515
Arst4g01714 1056 Gene3D Tetratricopeptide repeat domain 762 849 IPR011990 GO:0005515
Arst4g01714 1056 Gene3D Tetratricopeptide repeat domain 850 960 IPR011990 GO:0005515
Arst4g01714 1056 Gene3D Tetratricopeptide repeat domain 438 547 IPR011990 GO:0005515
Arst4g01714 1056 Gene3D Tetratricopeptide repeat domain 343 437 IPR011990 GO:0005515
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 207 241 IPR002885 -
Arst4g01714 1056 Gene3D Tetratricopeptide repeat domain 660 761 IPR011990 GO:0005515
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 869 899 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 799 833 IPR002885 -
Arst4g01714 1056 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 383 413 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01714 Arst-Chr4 28293271 28303667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01714 569 939 Glycosyltransferase AT1G05670 25.936 4.95e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01714 - K17964 gmx:100783405 1380.93