Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01648 ATGGCCGTTTCAATGAGAGATGTGGATCCAGCTTTCCAGGGGGCTGGACAAAAGGCTGGACTCGAAGTATGGCGTATTGAGGATTTTAATCCAGTTCCTGTCCCCAAGTCCTCTTTCGGGAAGTTTTTCACTGGGGACTCCTATGTGATCTTAAAGACAACTTCGTCAAAAAGTGGTGCTCTTCGGCATGATATCCATTATTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTAGATGCAGCTCTTGGAGGACGAGCTGTTCAATATCGTGAAGTACAGGGCCATGAAACTGAAAAGTTCCTGTCTTATTTCAAACCATGTATTATACCGCTAGAAGGTGGAGTTGCTTCTGGTTTCAAACATACTGAGGCAGAGAAACACAAGACACGATTGTTTGTATGCAGAGGGAAACATGTTGTACATGTCAAAGAGGTTCCATTTGCTCGATCTTCACTCAACCATGATGATATTTTTGTTCTTGATACGGAGTCAAAAATCTTCCAATTTAACGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAGGGAAAATGTGAGGTAGCTGCTATTGAGGATGGAAAATTGATGGCTGATCCTGAAACTGGAGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCACGCAAAACTGTTGGCGAAGATGAAAAGCCTGCTGATTCTCGCCCACCAAAGCTGCTTTGTGTTGAAAAAGGACAGGCAGAACTTGTTGAAACTGATTCTTTGAAAAGAGAATTACTGGATACAAATAAATGCTATATTCTGGACTGTGGGTTGGAGGTGTTTGTCTGGATGGGAAGAAACACCTCCCTTGATGAAAGGAAAAGTGCAAGTGGAGTAGCAGATGATTTAGTCAGTGGCACTGATAAATTGAAACCTCAAATAATTCGTATAATTGAAGGATTTGAAACAGTAATGTTCAGATCCAAGTTTGATTCTTGGCCTCAGATCACTGATGTAACCGTTTCTGAAGATGGACGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGAGTGAATGTCAAGGGTCTCTTGAAAGCTGATACAGTAAAGGAAGAACCTCAACCTTACATTGATTGCACAGGACATTTGCAGGTTTGGCGTGTGAATGGTCAGGAAAAGATCCTTCTTCAAGCCTCTGATCAGTCAAAATTTTATAGTGGGGATTGCTACATCTTTCAGTATACATACCCTGGAGAAGATAAAGAAGATTGTCTTATAGGGACATGGATTGGAAAGAATAGTGTTGAGGAAGATAGAGCTTCAGCAAATTCCTTGGCTAGCAAAATGGTTGAGTCAATGAAGTTCCTGGCATCCCAGGCACGTATATATGAAGGCAATGAACCCATTCAATTTCATACTATACTACAAACATTAATTGTTTTGAAGGGTGGACTTAGTGATGGATACAAGACTCACGTTGCAGAAAAAGAAATTCAAGATGAGACATATAAAGAGGATGGTGTTGCACTATTCCGCATCCAGGGCTCTGGACCAGACAACATGCAAGCTATACAAGTTGACTCAGTTGCATCCTCCTTGAATTCCTCTTATTGTTACATACTTCATAATGGGCCTGCTGTCTTTACATGGTCTGGAAGTGCTACAACTGCAACAGACCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAACCACAAAGGGAAGGTACAGAATCTGAACAATTTTGGGAATTGTTAGGAGGAAAATCAGAATATCCGAGCCAAAAGATCACTAGGGAGGCTGAAAGTGATCCTCACTTATTTTCTTGCAACTTCTCAAAAGGAAATTTGAAGGTGACAGAGGTGTACAACTTTTCCCAGGATGATTTGATGACAGAAGACATTTTCATTTTGGATTGTCACTCGGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGATCCCAAGAGTAGAATGCAGGCTCTGACAATTGGTGAGAAATTTCTTGAGCACGACTTTCTCCTGGAGAAGTTATCTCATGTGGCTCCAGTATATGTTATCAATGAAGGGAGTGAGCCACCGTTCTTCACTCGCTTCTTTAAATGGGATTCTGGAAAATCTGCAATGCTCGGAAATTCATTTCAGAGGAAGCTTACAATAGTGAAAAATGGAGGTGCTCCACTTCTGGATAAACCCAAGCGGAGAACACCTGCATCTTATGGGGGAAGGTCTAGTAGTGTGCCTGATAAAACTCAGCGTTCTTCCCGCAGCATGTCTGTTAGTCCTGATCGAGTACGTGTGAGGGGCAGGTCTCCAGCTTTTAATGCACTTGCAGCTAATTTTGAGAACCCTAATGCCAGGAATCTCTCAACTCCGCCGCCAGTAGTTCGAAAGCTGTATCCAAAATCTGTCACGCCAGATTCTGCAAAAGCAGCACCAAAATCTGCTGCCATAGCTGCTCTTAGCTCTAGTTTTGAACAACCACCTTCAGCACGAGAAAGTATGATACCTAGGTCAGTTAAAGTGAGCCTTTCTACTAACAAATCAAATCCCGAGACAAATGACAAGGACAAGGAGAGAGAGAATTCTGTGACCAATAAAGTGGAATCCCTATCCATAAAAGAAGATGCTAAAGAGGATGAAGCTGAAGATGAAGAAGGCCTCTTGATATACCCATATGAACGCCTCAAGATAACATCTACGGATCCTGTAACAGACATTGATGTGACTAAACGTGAGACTTACCTATCATCTGCGGAGTTCAAAGAGAAATTTGGGATGACAAAGGATGCATTTTACAAGTTGCCCAAATGGAAACAGAACAAACTTAAAATGGCTGTTCAGTTATTCTGA 2901 0.4212 MAVSMRDVDPAFQGAGQKAGLEVWRIEDFNPVPVPKSSFGKFFTGDSYVILKTTSSKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPLEGGVASGFKHTEAEKHKTRLFVCRGKHVVHVKEVPFARSSLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEVAAIEDGKLMADPETGEFWGFFGGFAPLPRKTVGEDEKPADSRPPKLLCVEKGQAELVETDSLKRELLDTNKCYILDCGLEVFVWMGRNTSLDERKSASGVADDLVSGTDKLKPQIIRIIEGFETVMFRSKFDSWPQITDVTVSEDGRGKVAALLKRQGVNVKGLLKADTVKEEPQPYIDCTGHLQVWRVNGQEKILLQASDQSKFYSGDCYIFQYTYPGEDKEDCLIGTWIGKNSVEEDRASANSLASKMVESMKFLASQARIYEGNEPIQFHTILQTLIVLKGGLSDGYKTHVAEKEIQDETYKEDGVALFRIQGSGPDNMQAIQVDSVASSLNSSYCYILHNGPAVFTWSGSATTATDQELVERMLDLIKPNLQSKPQREGTESEQFWELLGGKSEYPSQKITREAESDPHLFSCNFSKGNLKVTEVYNFSQDDLMTEDIFILDCHSEIFVWVGQQVDPKSRMQALTIGEKFLEHDFLLEKLSHVAPVYVINEGSEPPFFTRFFKWDSGKSAMLGNSFQRKLTIVKNGGAPLLDKPKRRTPASYGGRSSSVPDKTQRSSRSMSVSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPVVRKLYPKSVTPDSAKAAPKSAAIAALSSSFEQPPSARESMIPRSVKVSLSTNKSNPETNDKDKERENSVTNKVESLSIKEDAKEDEAEDEEGLLIYPYERLKITSTDPVTDIDVTKRETYLSSAEFKEKFGMTKDAFYKLPKWKQNKLKMAVQLF 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01648 966 Gene3D Severin 613 733 IPR029006 -
Arst4g01648 966 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Arst4g01648 966 SUPERFAMILY VHP, Villin headpiece domain 894 966 IPR036886 GO:0003779|GO:0007010
Arst4g01648 966 Gene3D Severin 133 247 IPR029006 -
Arst4g01648 966 CDD gelsolin_S2_like 138 223 - -
Arst4g01648 966 MobiDBLite consensus disorder prediction 755 777 - -
Arst4g01648 966 CDD gelsolin_S5_like 517 608 - -
Arst4g01648 966 Gene3D Severin 522 612 IPR029006 -
Arst4g01648 966 CDD gelsolin_S3_like 254 343 - -
Arst4g01648 966 MobiDBLite consensus disorder prediction 840 896 - -
Arst4g01648 966 CDD gelsolin_S1_like 12 124 - -
Arst4g01648 966 Gene3D Villin headpiece domain 904 966 IPR036886 GO:0003779|GO:0007010
Arst4g01648 966 FunFam Villin-like 1 613 734 - -
Arst4g01648 966 SUPERFAMILY Actin depolymerizing proteins 137 238 - -
Arst4g01648 966 Gene3D Severin 380 521 IPR029006 -
Arst4g01648 966 ProSiteProfiles Headpiece (HP) domain profile. 901 966 IPR003128 GO:0003779|GO:0007010
Arst4g01648 966 FunFam Villin-4 385 519 - -
Arst4g01648 966 SMART VILL_6 392 489 IPR007122 GO:0051015
Arst4g01648 966 SMART VILL_6 254 344 IPR007122 GO:0051015
Arst4g01648 966 SMART VILL_6 19 117 IPR007122 GO:0051015
Arst4g01648 966 SMART VILL_6 622 719 IPR007122 GO:0051015
Arst4g01648 966 SMART VILL_6 137 234 IPR007122 GO:0051015
Arst4g01648 966 SMART VILL_6 519 606 IPR007122 GO:0051015
Arst4g01648 966 MobiDBLite consensus disorder prediction 867 893 - -
Arst4g01648 966 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Arst4g01648 966 CDD gelsolin_S6_like 621 720 - -
Arst4g01648 966 Gene3D Severin 7 132 IPR029006 -
Arst4g01648 966 MobiDBLite consensus disorder prediction 741 782 - -
Arst4g01648 966 Pfam Gelsolin repeat 29 111 IPR007123 -
Arst4g01648 966 Pfam Gelsolin repeat 265 337 IPR007123 -
Arst4g01648 966 Pfam Gelsolin repeat 150 216 IPR007123 -
Arst4g01648 966 Pfam Gelsolin repeat 637 712 IPR007123 -
Arst4g01648 966 Pfam Gelsolin repeat 410 479 IPR007123 -
Arst4g01648 966 SMART VHP_1 931 966 IPR003128 GO:0003779|GO:0007010
Arst4g01648 966 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Arst4g01648 966 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Arst4g01648 966 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Arst4g01648 966 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Arst4g01648 966 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Arst4g01648 966 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Arst4g01648 966 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Arst4g01648 966 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Arst4g01648 966 FunFam Villin-like 1 904 966 - -
Arst4g01648 966 FunFam Gelsolin 6 131 - -
Arst4g01648 966 Pfam Villin headpiece domain 931 966 IPR003128 GO:0003779|GO:0007010
Arst4g01648 966 Gene3D Severin 248 355 IPR029006 -
Arst4g01648 966 CDD gelsolin_S4_like 386 482 - -
Arst4g01648 966 PANTHER VILLIN 7 956 IPR007122 GO:0051015
Arst4g01648 966 FunFam Gelsolin 520 612 - -
Arst4g01648 966 FunFam Villin-like 1 132 247 - -
Arst4g01648 966 SUPERFAMILY Actin depolymerizing proteins 511 615 - -
Arst4g01648 966 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Arst4g01648 966 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 255 427 IPR036180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01648 Arst-Chr4 25984367 25996921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01648 - - gmx:100808499 1740.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01648 4 25984367 25996921 Arst1g02824 1 90027654 90035792 PCT