Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01619 ATGGAGGGTACCCTCTTCCCCAATAGGCCAGTGTTACCAGCGCCACCAAACAAACCCACAAGGCCTTTGAAATCGAAGCCAACAACACTTCTTCCACCTCTTAACCCTCCTCCGCCGCCACCATCTCCGCCACCATCATTTCAATTGGATTCTCTTCTCCATCACTTGCAGAATCTCACTGCTGTCACTCCAACTCAGAACGACATGACCCATTTCCCTTCTTTACAGGTACTCCTTGATTCCTCTGAGAGAAAGCAACCCAATTCAGGTTCTGACCCCAGGATTGGTCAAGACCATATCTTTGATGCAAAGTTTGAATTTTTATCTGAAAAGGGTAAGTTGATGCTCAATTCGATTGTTGGGTCACCTTTGCGTCGCTTGAATGATTTTTTTGATTCTGCGAAATTTGAGTTGCTTGAAGTTGATTTGACAAGCCTGTTGAGGGCTTTGGACCTTTCTGGGAATTGGGAAAGGGCCATTTTGTTGTTTCAGTGGTTATTGTTGAATTTTGGGGATGAGAGTTTGAGGGTGGATAACCAGCTTATTGAAATTACGGCTAAGATATTAGGGAGAGAATCGCAGCATTCGATTGCATCCAAACTGTTTGATTTAATTCCTGTTGAAGAATACTCTCTTGATATCAAGGCTTACACCACTATTCTTCATGCATATGCTCGCACTGGAAAGTATAAGCGAGCTATTTATATCTTTGAGAAGATGAAGGAGAGTGGTCTTGATCCTAGTTTGGTCACTTACAATGTTATGCTTGATGTTTATGGCAAGATGGGTCGTTCCTGGAGTAAAATCTTGGGCCTATTGGATGAGATGAGAGACAAAGGGCTCGAGTTCGATGAGTTTACGTGCAGCACTGTGATCTCTGCTTGTGGGAGAGAGGGCATGCTAGAGGAAGCAAGGAAATTTTTCGCTGAAATAAAATCCAATGGCTATAAACCGGGAACTGTTACTTATAATTCGCTGCTGCAGGTGTTTGGAAAGGCTGGAGTTTATGCAGAGGCGTTGAGCATCTTAAAGGAAATGGAGGATAACAATTGCCCACCTGATGCTGTCACTTACAATGAGCTTGTGGCAGCATATGTAAGAGCTGGGTTTCTTGATGAAGGTGCCGGTGTCATAGATACAATGACCAGTGGAGGAGTAATGCCAAATGCTGTTACTTACACAACCATTATAAATGCATATGGTAAGGCAGGGAATGAAGACAAGGCGTTAAAGTTGTTCGCCCAAATGAAGGAGTCGGGTTGTGTCCCTAATGTGTGCACATACAATGCGGTTCTTGCAATGCTAGGAAAAAAGATGAGATCAAAAGACATGATTAAGGTTTTCTGTGACATGAAGTTGAACAGATGTGCTCCTAATCGTGCTACGTGGAACACCATGCTTGCTGTGTGTGGTGATAAGGGTAAGCACAATTATGTCAACCAGGTTCTAAGAGAAATGAAGAACTGCGGATTTGAGCCTGATAAAGACACATTCAATACGTTAATTAGTGCATATGGTAGGTGTGGATCCGAAGTTGATGCTGCAAAAATGTATGGGGAAATGATTAAAGCTGGCTTTACTCCATGCGTAACAACTTATAATTCTCTTCTAAATGCTCTTGCAAGGCGAGGTGATTGGAAAGCAGCTGAATCTGTCATTCAGGACATGGCGAAGAAGGGCTTTAAGCCTAATGAAACCTCATACTCGCTTTTGCTTCATTGTTATTCCAAGAATGGGAACATCAAGGGCATAGAGAAAGTTGAGAAAGAAATCTACAATGGCCAGGTATTTCCCAGTTGGATGCTTTCAAGAACACTTGTCATAGCATATTCCAAGTGCAGGCACCTTAAGGGAATGGAAAGGACGTTTCAGCAACTGCAAAAGAATGGATACAAGCCTGATTTGGTCATAGTTAATGCCATGCTCTCTATGTTTGTTCGAAACAAGTTGTACGATAAGGCGCATGAAATGGTGCATTTTGTTCATGAAATCGGACTGCAGCCGAATCTTGTTACCTATAATAGCTTGATGGACTTGCATGCCCGAGAGGGCGAGTGTTGGAAAGCCGAAGAATTGCTCAAAGGAATCCAAAGCTCGGGTCATAAGCCGGATGTTGTGTCTTATAACACTGTCATTAAGGGGTTCTGCAAGCAAGGGCTCATGCAGGAGGCTATTAGAGTCCATTCGGAGATGACCGCTAACGGAATTCGACCGTGCATCTTCACATACAACACATTTTTGGCAGGCTATTCAGGGCAGGGGTTGTTCAAGGAAGCAGAAGAGGTGATTATGTATATGATTGAACACAATTGCAGGCCAAATGAGATGAGTTACAAGATTGTTGTTGATGCTTATTGTAAAGCAAAGAAATATAAAGAAGCAGTGATCTTTGTGTCAGAGATTAAGCAGTTTGATGACTCTTTTGATGACCAATCTGTGAAAAGGCTATCTTCTTACATTTGGGAGATTTCAGGGTCTTGA 2481 0.4272 MEGTLFPNRPVLPAPPNKPTRPLKSKPTTLLPPLNPPPPPPSPPPSFQLDSLLHHLQNLTAVTPTQNDMTHFPSLQVLLDSSERKQPNSGSDPRIGQDHIFDAKFEFLSEKGKLMLNSIVGSPLRRLNDFFDSAKFELLEVDLTSLLRALDLSGNWERAILLFQWLLLNFGDESLRVDNQLIEITAKILGRESQHSIASKLFDLIPVEEYSLDIKAYTTILHAYARTGKYKRAIYIFEKMKESGLDPSLVTYNVMLDVYGKMGRSWSKILGLLDEMRDKGLEFDEFTCSTVISACGREGMLEEARKFFAEIKSNGYKPGTVTYNSLLQVFGKAGVYAEALSILKEMEDNNCPPDAVTYNELVAAYVRAGFLDEGAGVIDTMTSGGVMPNAVTYTTIINAYGKAGNEDKALKLFAQMKESGCVPNVCTYNAVLAMLGKKMRSKDMIKVFCDMKLNRCAPNRATWNTMLAVCGDKGKHNYVNQVLREMKNCGFEPDKDTFNTLISAYGRCGSEVDAAKMYGEMIKAGFTPCVTTYNSLLNALARRGDWKAAESVIQDMAKKGFKPNETSYSLLLHCYSKNGNIKGIEKVEKEIYNGQVFPSWMLSRTLVIAYSKCRHLKGMERTFQQLQKNGYKPDLVIVNAMLSMFVRNKLYDKAHEMVHFVHEIGLQPNLVTYNSLMDLHAREGECWKAEELLKGIQSSGHKPDVVSYNTVIKGFCKQGLMQEAIRVHSEMTANGIRPCIFTYNTFLAGYSGQGLFKEAEEVIMYMIEHNCRPNEMSYKIVVDAYCKAKKYKEAVIFVSEIKQFDDSFDDQSVKRLSSYIWEISGS 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 634 668 IPR002885 -
Arst4g01619 826 Gene3D Tetratricopeptide repeat domain 474 593 IPR011990 GO:0005515
Arst4g01619 826 Gene3D Tetratricopeptide repeat domain 385 473 IPR011990 GO:0005515
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 354 388 IPR002885 -
Arst4g01619 826 Pfam PPR repeat 700 732 IPR002885 -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 459 493 IPR002885 -
Arst4g01619 826 MobiDBLite consensus disorder prediction 1 48 - -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 669 703 IPR002885 -
Arst4g01619 826 Pfam PPR repeat 286 315 IPR002885 -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 284 318 IPR002885 -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 739 773 IPR002885 -
Arst4g01619 826 Pfam PPR repeat family 528 576 IPR002885 -
Arst4g01619 826 Pfam PPR repeat family 458 505 IPR002885 -
Arst4g01619 826 Pfam PPR repeat family 738 787 IPR002885 -
Arst4g01619 826 Pfam PPR repeat family 318 365 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 250 284 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 216 248 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 497 528 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 321 355 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 391 425 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 426 459 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 741 775 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 286 319 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 462 494 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 532 565 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 706 738 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 356 390 IPR002885 -
Arst4g01619 826 NCBIfam pentatricopeptide repeat 671 705 IPR002885 -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 248 283 IPR002885 -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 704 738 IPR002885 -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 423 IPR002885 -
Arst4g01619 826 Gene3D Tetratricopeptide repeat domain 660 732 IPR011990 GO:0005515
Arst4g01619 826 Gene3D Tetratricopeptide repeat domain 733 807 IPR011990 GO:0005515
Arst4g01619 826 Gene3D Tetratricopeptide repeat domain 312 384 IPR011990 GO:0005515
Arst4g01619 826 Gene3D Tetratricopeptide repeat domain 594 659 IPR011990 GO:0005515
Arst4g01619 826 MobiDBLite consensus disorder prediction 29 47 - -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 494 528 IPR002885 -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 319 353 IPR002885 -
Arst4g01619 826 SUPERFAMILY HCP-like 215 418 - -
Arst4g01619 826 Pfam Pentatricopeptide repeat domain 623 679 IPR002885 -
Arst4g01619 826 Pfam Pentatricopeptide repeat domain 377 437 IPR002885 -
Arst4g01619 826 Pfam Pentatricopeptide repeat domain 212 262 IPR002885 -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 213 247 IPR002885 -
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 529 563 IPR002885 -
Arst4g01619 826 PANTHER OS03G0856100 PROTEIN 301 587 - -
Arst4g01619 826 FunFam Pentatricopeptide repeat-containing protein At1g74850, chloroplastic 264 366 - -
Arst4g01619 826 Gene3D Tetratricopeptide repeat domain 139 311 IPR011990 GO:0005515
Arst4g01619 826 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 424 458 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01619 Arst-Chr4 25216789 25219647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01619 616 805 Glycosyltransferase AT1G05670 25.000 2.05e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01619 K17710 - gmx:100803889 1237.25