Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01608 ATGCAATTCTTGTCAGTGGGTTTACCGGCCAATAAGGTTCCGGTTCGGTCACTGAACATGAACCCAACAAGAATGTCAATGAAGGACCCTGGCAACATGGCTGTGGTGGCTGCTCCCAAATGGGCCCAGAAAACCATTACTTTGCCTCCTCACAAACGCGGTTGTCATCTCGTTACTCCAAAGATAGTGAAAGAAATTGAACAAGATTTGTCTGGATTCAAGTGTGGCCTAGCTCATGTATTTTTGCATCACACAAGTGCTTCTCTAACCATCAATGAGAATTATGACTATGATGTTCGGGATGATACAGAAACGTTCCTAAATCGGATAGTTCCTGAGGGGCCATCTGCACCTTGGAGGCATACTATAGAGGGCCCAGATGACATGCCTGCACATATCAAATCATCTATGTTTGGTTGTGCACTCATGATACCTATTACGAATGGAAGGCTTAACATGGGAACATGGCAGGGTATATGGCTTTGTGAGCACCGGGATTATCCTACACCCCGCACAGTTGTCGTCACTCTTAATGGAATATGA 543 0.453 MQFLSVGLPANKVPVRSLNMNPTRMSMKDPGNMAVVAAPKWAQKTITLPPHKRGCHLVTPKIVKEIEQDLSGFKCGLAHVFLHHTSASLTINENYDYDVRDDTETFLNRIVPEGPSAPWRHTIEGPDDMPAHIKSSMFGCALMIPITNGRLNMGTWQGIWLCEHRDYPTPRTVVVTLNGI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01608 180 NCBIfam secondary thiamine-phosphate synthase enzyme YjbQ 49 179 IPR001602 -
Arst4g01608 180 Gene3D - 33 179 IPR035917 -
Arst4g01608 180 FunFam Secondary thiamine-phosphate synthase enzyme 31 179 - -
Arst4g01608 180 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 28 180 IPR001602 -
Arst4g01608 180 SUPERFAMILY YjbQ-like 40 179 IPR035917 -
Arst4g01608 180 Pfam Uncharacterised protein family UPF0047 58 176 IPR001602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01608 Arst-Chr4 24829880 24832270 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01608 - - gmx:100500593 306.99