Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01519 ATGATTTTTCTTAGTAGGATGTTCTCTTTTGTTTTATATATCTTTTCTGATTTGGTTTACTGTTTTATAGTTGCTGGCAAGGATTTTGAAGGAGACAAAGAATTTTATAGCAATGAAGAATGGCAAGAAAGAGTAGAGAAATGGAAAGTAAGGCAAGAGAAGAAAGGTTTGCTAAACAAAGAGGAAGAAAAAGAACAAGTTGAAGATGATGATTACCTTTTGGCGGAAGCGAGGCAACCACTATGGCGCAAGGTTCCAATAGCTTCAAGCCTAATCAACCCATATCGCATAGTGATTGTGATGAGGCTGGTGATCCTAGCATTCTTTTTCAGATTTCGGATCTTAACTCCGGCCTATGATGCATATCCCTTGTGGCTTATCTCTGTGATATGTGAGATATGGTTTGCAATGTCATGGATCCTTGATCAGTTCCCAAAGTGGTTCCCAATCACACGCGAGACTTACTTGGACCGGTTGTCCATAAGGTTCGAGCGGGAAGGGGAGCCAAACCAACTGTGCCCTGTTGATGTGTTTGTGAGTACTGTGGATCCTCTGAAGGAGCCACCAATCATAACAGCAAACACTGTTCTTTCAATCCTCTCTGTTGACTATCCTGTTGAGAAGGTGTGCTGCTATGTCTCGGACGATGGTGCTTCCATGCTCCTCTTTGATTCGTTGGCCGAAACTGCCGAGTTTGCAAGAAGATGGGTTCCATTCTGCAAAAAGTATAAGATCGAGCCAAGGGCTCCTGAGTTCTATTTCTCTGAGAAGATTGATTACTTGAAGGACAAGGTTCAGCCTACATTCGTTAAGGAGCGAAGAGCCATGAAGAGAGAATATGAAGAATTCAAAGTGAAAATCAATGCCTTGGTGGCAAAGGCTCAGAAGAAACCAGAAGATGGATGGGTGATGCAAGATGGAACTCCATGGCCGGGAAACAACACTCGCGATCATCCGGGAATGATTCAGGTATATTTGGGTAGTGCTGGTGCACTAGACGTGGAAGGCAAGGAACTGCCACGACTCGTGTATATTTCGCGTGAGAAACGGCCTGGCTATCCACACCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTTCTTACAAATGCACCTTTCATGCTGAATCTGGATTGTGATCACTACATCAATAATAGCAAGGCTTTAAGAGAGGCTATGTGCTTCTTAATGGACCCCCAGCTTGGGAAGAAGCTCTGTTATGTCCAATTTCCACAAAGATTCGATGGTATTGATCGCCATGATAGATATGCTAATCGAAACACTGTGTTCTTTGATATCAATATGAAAGGACTAGATGGGATTCAAGGTCCGGTTTATGTTGGTACTGGAACTGTGTTCAACAGGCAAGCATTGTACGGCTATGATCCACCGGTATCCGAGAAGAGGCCCAAGATGACTTGTGACTGTTGGCCATCATGGTGTTGCTTTTGTTGCGGTGGTTCCAGGAAATCCAAGTCAAAAAAGAAATCAGGAGCAGGAAGTGGTCTCTTAGGTGCATTATACAACAACAAGAAGAAGAAAATGATGGGAAAAAATTATGTTAGAAAGGGTTCTGGCTCCATGTTTGATCTTGAAGAGATTGAAGAAGGTCTTGAAGGCTATGAGGAGCTAGAGAAGTCATCTCTCATGTCACAGAAAAACTTTGAGAAGCGATTCGGGCAATCGCCGGTTTTCATTGCTTCCACTTTGATGGAGAATGGAGGACTACCTGAAGGCACCAATTCTCAAGCATTGGTTAAGGAGGCCATTCATGTTATAAGCTGTGGCTATGAAGAGAAGACTGATTGGGGCAAAGAGATTGGATGGATTTATGGGTCAGTGACAGAAGATATTTTGACTGGATTCAAGATGCACTGTAGAGGATGGAAATCAGTGTATTGCATGCCAAAGAGGGCAGCTTTCAAGGGATCTGCACCAATAAATCTATCAGATAGGTTGCACCAAGTTCTGAGGTGGGCTCTTGGTTCAGTTGAGATTTGCCTAAGTCGCCATTGTCCATTATGGTATGGCTATGGAGGAAAGTTGAAGTACCTAGAGAGGTTGGCTTACACTAACACCATTGTTTATCCATTCACTTCCATTCCTTTGCTTGCATATTGCACAATACCAGCTGTTTGTCTCTTGACCGGGAAATTCATCATCCCCACTCTGACCAACCTTGCTAGTGTATGGTTCATGGCCCTATTTATCTCCATCATCTTAACCGGTGTCCTCGAGCTCCGGTGGAGTGGCGTTACCATAGAAGACTGGTGGCGAAACGAGCAATTCTGGGTGATCGGAGGCGTATCGGCCCACCTTTTCGCCGTATTCCAAGGACTTCTGAAAGTCCTTGCCGGAGTAGACACCAACTTCACTGTCACAGCAAAAGCAGCAGACGATACAGAATTCGGAGAGCTGTATATGTTCAAATGGACAACACTTCTCATCCCACCAACCACTCTCATAATCTTGAACATTGTTGGAGTTGTAGCTGGTGTGTCTGATGCAATCAACAATGGATATGGATCATGGGGTCCCTTGTTTGGGAAGCTATTCTTTGCATTTTGGGTCATTGTTCACTTATATCCTTTCCTTAAAGGTCTCATGGGGAAACAAAACAGAACTCCTACTATTGTGGTTCTTTGGTCAATTCTTTTGGCTTCTATTTTCTCATTGATTTGGGTTAGGATTGATCCTTTCTTGCCAAAGCAAACAGGTCCAATACTCAAACAATGTGGTGTAGAATGCTAA 2763 0.4368 MIFLSRMFSFVLYIFSDLVYCFIVAGKDFEGDKEFYSNEEWQERVEKWKVRQEKKGLLNKEEEKEQVEDDDYLLAEARQPLWRKVPIASSLINPYRIVIVMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFAMSWILDQFPKWFPITRETYLDRLSIRFEREGEPNQLCPVDVFVSTVDPLKEPPIITANTVLSILSVDYPVEKVCCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYKIEPRAPEFYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVKINALVAKAQKKPEDGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPRLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCFCCGGSRKSKSKKKSGAGSGLLGALYNNKKKKMMGKNYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKNFEKRFGQSPVFIASTLMENGGLPEGTNSQALVKEAIHVISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEICLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVTIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDTEFGELYMFKWTTLLIPPTTLIILNIVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01519 920 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 285 466 IPR029044 -
Arst4g01519 920 FunFam Cellulose synthase 292 466 - -
Arst4g01519 920 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 78 887 - -
Arst4g01519 920 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 78 887 - -
Arst4g01519 920 Coils Coil 273 293 - -
Arst4g01519 920 SUPERFAMILY Nucleotide-diphospho-sugar transferases 188 724 IPR029044 -
Arst4g01519 920 Pfam Cellulose synthase 175 913 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst4g01519 920 Pfam Cellulose synthase 175 913 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst4g01519 920 Coils Coil 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01519 Arst-Chr4 20649338 20653705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01519 161 920 Glycosyltransferase AT5G44030 84.286 0.0 1343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01519 K10999 - gmx:100781996 1651.72