Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01491 ATGCCACCGCCGCCACCAGCACCAGATCTTCCTGGGTTTTACTATGACCCTGAGAAGAATAGGTATTTCCCCATCAAAGGTCCCATACCAGGCTCTTCTCATTCTTCATCTTCATCTTCAAAGCATGCTACTCACAAAGCATCCCAAACATCTTCAACTCAGGAAAAGAGTAGGAGTTGTTGCAGGAAGCTTAGAAGCAGAACCTCCAAGTTGATTCAGGCTAGGGAGATAGATGGTCATCGTGTCATTGCTTCCCACAATTACAAGTGTAACTTCACTGAGGAGTTTAGGAAAATACAAGCATCACAGCCTTCGGTATGGAAGTATAAGGGAACAGATAAGATTGGTATTAGTGCTTTGAAACAGGTGCATGTCCGTGTGCAGACATTTGAGGGTGAATGTGATAGTGATGTTATATTGACAGGCAGCACCAATGGCTCATTCAGTCTTTGTGAAGTTGGAAGGGATGGGGGATATTTTGATGGTGAGGTTAAGTGGACGCCCGATTGTGTGAAGAATTATGCTAAAGGGAAAACTGATGAGAATAATGTGGTGCCTGGTCCAGTTTCAAGACCTACTGGAGGGTCCGTGGTTATGTCATCTGGTATATCTTGCATAAGATCAGGCCCGGAGTGTTCTTCTCATGCTGCAAATGGCGGTCCTATTGTTGGACATGCATTGTTTACAACTTTGGGTTCAGAGACATCCGGTGGGTCAATTTATTCTCTTGGCCTTGTGGAATCATTAGATCTTGGGTCAGGTATACTGAACACATGGAGCAGACTGGATGAAGTTGCTTCTTTCAAGTGTACCATTTGGACAGCAGAATATGATTATAGTAGACATCGGGCTATAATTGGTACCAACATGGGAGCTGCATTGGTGGATTTGGCAACTGGGAGGAGATCATGGTTTTTACGATGTAAAAGTGATATCTTTGCACAGCAGATTGTGAATTCACATGAGAAAAGAGAAAGAGTCTCGCGAACACTTATTGAACATAGGATACCTTATGCATCACCAAATAAGAAAGTTCGAAATTCTAGTAAAGAATGGTTCAAGCTCAGTGGAGATATAGACCCTTCTCTTACCATTAGAATGCCTTCATCTATATCCAGTTTGGTATCACTTCAGTATGATGATCAGTACTTCTTGGCAAGCTCCATGGACGGAACGATGAGGCTCTATGATCTTCGCCTGCTTCAGAGAGGTTCTGTTCAATCTTATGAAGGGCATGTGAATTCCCATTCGCGTATACAACTCGGTGTTGACCCAGATGAGAGATTTGTTATGTCAGGTGGAGAGGATCGCAACCTACGGTCGTGGAGTATCAAAACTGGCAAACTTCTTTTTGAGGAAAAATTCTGTGATTCAGTTCTCTCCAGTGTTTGCTATCAATCATGTAAAGGGTTTAAAGATGAGGATGAAAAGAACCAACACAAGCATGAATCTTGTATGAGTGCATGGCTTGGATCACATGATGAAGGACTATTTTATATGCGCTGGTTATGTGTGTGA 1518 0.4282 MPPPPPAPDLPGFYYDPEKNRYFPIKGPIPGSSHSSSSSSKHATHKASQTSSTQEKSRSCCRKLRSRTSKLIQAREIDGHRVIASHNYKCNFTEEFRKIQASQPSVWKYKGTDKIGISALKQVHVRVQTFEGECDSDVILTGSTNGSFSLCEVGRDGGYFDGEVKWTPDCVKNYAKGKTDENNVVPGPVSRPTGGSVVMSSGISCIRSGPECSSHAANGGPIVGHALFTTLGSETSGGSIYSLGLVESLDLGSGILNTWSRLDEVASFKCTIWTAEYDYSRHRAIIGTNMGAALVDLATGRRSWFLRCKSDIFAQQIVNSHEKRERVSRTLIEHRIPYASPNKKVRNSSKEWFKLSGDIDPSLTIRMPSSISSLVSLQYDDQYFLASSMDGTMRLYDLRLLQRGSVQSYEGHVNSHSRIQLGVDPDERFVMSGGEDRNLRSWSIKTGKLLFEEKFCDSVLSSVCYQSCKGFKDEDEKNQHKHESCMSAWLGSHDEGLFYMRWLCV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01491 505 ProSiteProfiles Trp-Asp (WD) repeats profile. 421 452 IPR001680 GO:0005515
Arst4g01491 505 MobiDBLite consensus disorder prediction 30 57 - -
Arst4g01491 505 Pfam WD domain, G-beta repeat 406 443 IPR001680 GO:0005515
Arst4g01491 505 PANTHER DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED 6 502 - -
Arst4g01491 505 SUPERFAMILY WD40 repeat-like 127 462 IPR036322 GO:0005515
Arst4g01491 505 SMART WD40_4 358 397 IPR001680 GO:0005515
Arst4g01491 505 SMART WD40_4 402 443 IPR001680 GO:0005515
Arst4g01491 505 MobiDBLite consensus disorder prediction 1 60 - -
Arst4g01491 505 Gene3D - 356 470 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01491 Arst-Chr4 19798811 19805029 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01491 382 466 Miscellaneous Gene Families AT5G08390 29.412 1.75e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01491 K11799 - gmx:100798753 655.21